C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene, 17572
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171455 Gm17572-201 ENSMUSG00000091548 10090 + 17:31950549-31950968 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLiverOvaryTestisENSMUST00000171455
Transcript ID Kidney Liver Ovary Testis
ENSMUST00000171455 0.149±0.05 0.207±0.00 0.313±0.00 0.182±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000617 CIL_000617_0002 CGP 17:31844248-32034508

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000082327 pabpc4-001 protein_coding Danio_rerio 1.99993e-41 172
ENST00000372856 PABPC4-004 protein_coding Homo_sapiens 0 425
ENST00000372857 PABPC4-001 protein_coding Homo_sapiens 0 425
ENST00000372858 PABPC4-002 protein_coding Homo_sapiens 0 425
ENST00000372862 PABPC4-003 protein_coding Homo_sapiens 0 425
ENST00000414338 RP11-393N21.1-001 processed_pseudogene Homo_sapiens 2e-30 135
ENST00000421687 PABPC4-017 protein_coding Homo_sapiens 0 307
ENST00000437136 PABPC4-013 protein_coding Homo_sapiens 0 387
ENST00000468476 PABPC4-006 retained_intron Homo_sapiens 1e-22 113
ENST00000482028 PABPC4-012 retained_intron Homo_sapiens 2e-23 113
ENST00000492468 PABPC4-005 retained_intron Homo_sapiens 0 348
ENST00000530186 PABPC4-024 protein_coding Homo_sapiens 0 243
ENST00000549280 RP11-813P10.2-001 processed_pseudogene Homo_sapiens 0 340
ENST00000555663 CTD-2643K12.1-001 processed_pseudogene Homo_sapiens 0 368

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