C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00061R_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000089871-ENSDARG00000055075 CGP 7955 12:25185407-25355017
GeneTranscriptPositionBiotype
ENSDARG00000055075 (svila)
supervillin a 		ENSDART00000066331 (svila-001) 25234971-25355017 protein_coding
ENSDART00000077314 (svila-201) 25234969-25355016 protein_coding
ENSDART00000152852 (svila-004) 25315413-25326579 protein_coding
ENSDART00000152864 (svila-002) 25334515-25355017 protein_coding
ENSDART00000152869 (svila-007) 25297759-25302152 protein_coding
ENSDART00000152921 (svila-006) 25273102-25293089 protein_coding
ENSDART00000152997 (svila-005) 25261240-25288794 processed_transcript
ENSDART00000153195 (svila-003) 25345766-25354456 nonsense_mediated_decay
ENSDARG00000089871 (si:ch211-203c7.2)
si:ch211-203c7.2 		ENSDART00000128769 (si:ch211-203c7.2-201) 25206714-25218348 protein_coding
ENSDART00000152942 (si:ch211-203c7.2-001) 25185407-25219007 protein_coding
CIL_00061R_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033960-ENSMUSG00000024236 CGP 10090 18:4634929-5119299
GeneTranscriptPositionBiotype
ENSMUSG00000024236 (Svil)
supervillin 		ENSMUST00000025079 (Svil-201) 5046575-5119288 protein_coding
ENSMUST00000125512 (Svil-012) 5064472-5119291 nonsense_mediated_decay
ENSMUST00000126977 (Svil-001) 4920540-5119291 protein_coding
ENSMUST00000127297 (Svil-013) 5040226-5118440 protein_coding
ENSMUST00000129543 (Svil-006) 5114253-5119218 retained_intron
ENSMUST00000131210 (Svil-004) 4920567-5058390 retained_intron
ENSMUST00000131609 (Svil-005) 5040228-5118164 nonsense_mediated_decay
ENSMUST00000138258 (Svil-003) 4920705-5058306 retained_intron
ENSMUST00000139761 (Svil-011) 5094381-5095516 retained_intron
ENSMUST00000140448 (Svil-008) 4994618-5118610 protein_coding
ENSMUST00000143254 (Svil-002) 4921726-5119299 protein_coding
ENSMUST00000146723 (Svil-010) 5103675-5117021 protein_coding
ENSMUST00000148564 (Svil-009) 4994936-5003076 processed_transcript
ENSMUST00000153016 (Svil-007) 4993813-5046877 protein_coding
ENSMUSG00000033960 (9430020K01Rik)
RIKEN cDNA 9430020K01 gene 		ENSMUST00000037029 (9430020K01Rik-201) 4634929-4682868 protein_coding
ENSMUSG00000097043 (Gm10556)
predicted gene 10556 		ENSMUST00000180904 (Gm10556-201) 4812486-4850959 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00061R_0001ENSDARG00000055075ENSDART00000066331ENSDART00000077314ENSDART00000152852ENSDART00000152864ENSDART00000152869ENSDART00000152921ENSDART00000152997ENSDART00000153195ENSDARG00000089871ENSDART00000128769ENSDART00000152942CIL_00061R_0002ENSMUSG00000024236ENSMUST00000025079ENSMUST00000125512ENSMUST00000126977ENSMUST00000127297ENSMUST00000129543ENSMUST00000131210ENSMUST00000131609ENSMUST00000138258ENSMUST00000139761ENSMUST00000140448ENSMUST00000143254ENSMUST00000146723ENSMUST00000148564ENSMUST00000153016ENSMUSG00000033960ENSMUST00000037029ENSMUSG00000097043ENSMUST00000180904
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00061R_0001ENSDARG00000055075ENSDART00000066331ENSDART00000077314ENSDART00000152864ENSDARG00000089871ENSDART00000128769ENSDART00000152942CIL_00061R_0002ENSMUSG00000024236ENSMUST00000025079ENSMUST00000125512ENSMUST00000126977ENSMUST00000127297ENSMUST00000129543ENSMUST00000131210ENSMUST00000131609ENSMUST00000140448ENSMUST00000143254ENSMUST00000146723ENSMUSG00000033960ENSMUST00000037029ENSMUSG00000097043ENSMUST00000180904
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000055075 ENSDART00000066331 N/A N/A N/A N/A N/A N/A 5.418±0.67 2.847±3.12 0.355±0.00 N/A 1.943±0.00 N/A N/A N/A
ENSDART00000077314 N/A N/A N/A 1.519±0.40 N/A N/A N/A 1.864±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000152852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000152864 N/A N/A N/A 4.385±1.75 N/A N/A 14.712±11.56 3.976±3.05 N/A N/A 5.337±0.00 N/A N/A N/A
ENSDART00000152869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000152921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000152997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000153195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000089871 ENSDART00000128769 N/A N/A N/A 2.665±1.50 N/A N/A 8.014±2.96 1.582±0.35 0.155±0.00 N/A 2.292±0.00 N/A N/A N/A
ENSDART00000152942 N/A N/A N/A 0.987±0.39 N/A N/A 6.316±2.91 1.299±0.66 N/A N/A 1.423±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024236 ENSMUST00000025079 N/A N/A N/A N/A 6.285±0.00 N/A 19.418±0.94 N/A N/A N/A 15.961±1.55 N/A N/A 0.216±0.00
ENSMUST00000125512 6.817±2.85 2.218±0.24 26.377±0.00 1.283±0.17 7.376±1.69 3.423±0.33 13.964±3.58 2.557±0.45 2.286±0.59 8.709±1.46 13.248±2.26 5.597±0.89 2.144±0.74 0.574±0.18
ENSMUST00000126977 4.463±0.00 1.085±0.36 N/A N/A 4.183±1.61 2.517±0.98 N/A 0.616±0.00 N/A 3.324±0.45 N/A 2.924±0.00 N/A N/A
ENSMUST00000127297 5.327±0.31 0.860±0.00 19.146±0.00 N/A N/A 3.290±0.83 N/A N/A N/A N/A N/A 4.438±0.76 1.326±0.00 0.217±0.00
ENSMUST00000129543 N/A N/A N/A N/A 14.313±3.85 N/A N/A N/A 2.820±0.06 N/A N/A N/A N/A N/A
ENSMUST00000131210 N/A 2.944±0.43 N/A N/A 8.994±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131609 N/A N/A N/A 1.266±0.00 N/A N/A N/A N/A N/A N/A N/A 4.275±0.00 N/A N/A
ENSMUST00000138258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.753±2.99 N/A N/A N/A
ENSMUST00000143254 6.077±2.13 1.582±0.31 11.446±0.00 1.021±0.66 5.418±1.10 N/A N/A 2.749±0.32 2.957±0.88 7.398±2.13 N/A 8.111±0.00 4.223±0.06 N/A
ENSMUST00000146723 N/A 7.673±0.39 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000033960 ENSMUST00000037029 10.996±2.75 9.418±0.94 5.238±2.07 5.622±4.53 6.228±0.56 1.792±0.17 8.692±0.35 3.875±0.13 2.107±1.01 37.306±3.85 3.583±0.36 7.212±1.46 9.004±5.43 9.264±0.73
ENSMUSG00000097043 ENSMUST00000180904 N/A 0.071±0.00 N/A 0.005±0.00 0.031±0.01 N/A N/A N/A 0.023±0.01 N/A N/A 0.052±0.00 0.004±0.00 0.040±0.02

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