C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: supervillin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125512 Svil-012 ENSMUSG00000024236 10090 + 18:5064472-5119291 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000125512
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000125512 6.817±2.85 2.218±0.24 26.377±0.00 1.283±0.17 7.376±1.69 3.423±0.33 13.964±3.58 2.557±0.45 2.286±0.59 8.709±1.46 13.248±2.26 5.597±0.89 2.144±0.74 0.574±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00061R CIL_00061R_0002 CGP 18:4634929-5119299

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000077314 svila-201 protein_coding Danio_rerio 0 289
ENSDART00000152864 svila-002 protein_coding Danio_rerio 0 289
ENSDART00000066331 svila-001 protein_coding Danio_rerio 0 274
ENSDART00000153195 svila-003 nonsense_mediated_decay Danio_rerio 4.99997e-41 174
ENST00000355867 SVIL-003 protein_coding Homo_sapiens 0 2069
ENST00000375398 SVIL-201 protein_coding Homo_sapiens 0 2069
ENST00000375400 SVIL-001 protein_coding Homo_sapiens 0 2069
ENST00000422642 SVILP1-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 1637
ENST00000435645 SVILP1-002 processed_transcript Homo_sapiens 0 278
ENST00000482607 SVIL-010 processed_transcript Homo_sapiens 0 350

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