C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00062C_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000020749-ENSDARG00000032653 CGP 7955 4:15683210-15712892
GeneTranscriptPositionBiotype
ENSDARG00000020749 (caprin2)
caprin family member 2 		ENSDART00000040708 (caprin2-001) 15683210-15696985 protein_coding
ENSDART00000064009 (caprin2-201) 15683465-15696858 protein_coding
ENSDART00000125323 (caprin2-202) 15683211-15696986 protein_coding
ENSDARG00000032653 (fam60a)
family with sequence similarity 60, member A 		ENSDART00000042307 (fam60a-001) 15703630-15712892 protein_coding
ENSDART00000126608 (fam60a-201) 15700129-15709926 protein_coding
CIL_00062C_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030309-ENSMUSG00000039985 CGP 10090 6:148842492-148946467
GeneTranscriptPositionBiotype
ENSMUSG00000030309 (Caprin2)
caprin family member 2 		ENSMUST00000072324 (Caprin2-003) 148842493-148896150 protein_coding
ENSMUST00000111569 (Caprin2-001) 148842492-148896237 protein_coding
ENSMUST00000122909 (Caprin2-004) 148894170-148895609 processed_transcript
ENSMUST00000127941 (Caprin2-008) 148842493-148851396 processed_transcript
ENSMUST00000132535 (Caprin2-002) 148844039-148849184 retained_intron
ENSMUST00000139914 (Caprin2-006) 148877915-148895459 protein_coding
ENSMUST00000151640 (Caprin2-007) 148844567-148851367 processed_transcript
ENSMUST00000154971 (Caprin2-005) 148847610-148860588 processed_transcript
ENSMUSG00000039985 (Fam60a)
family with sequence similarity 60, member A 		ENSMUST00000054080 (Fam60a-001) 148921035-148946467 protein_coding
ENSMUST00000081956 (Fam60a-002) 148921057-148944826 protein_coding
ENSMUST00000111562 (Fam60a-007) 148922713-148944812 protein_coding
ENSMUST00000127063 (Fam60a-003) 148944390-148946443 processed_transcript
ENSMUST00000132696 (Fam60a-006) 148926051-148946155 protein_coding
ENSMUST00000139355 (Fam60a-005) 148928580-148946356 protein_coding
ENSMUST00000143963 (Fam60a-008) 148932503-148946390 retained_intron
ENSMUST00000146457 (Fam60a-004) 148930619-148946415 protein_coding
ENSMUSG00000085355 (3010003L21Rik)
RIKEN cDNA 3010003L21 gene 		ENSMUST00000047953 (3010003L21Rik-201) 148944867-148947121 lincRNA
ENSMUST00000154673 (3010003L21Rik-001) 148944867-148947129 lincRNA
ENSMUSG00000095288 (Gm7618)
predicted pseudogene 7618 		ENSMUST00000121643 (Gm7618-001) 148900968-148901138 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00062C_0001ENSDARG00000020749ENSDART00000040708ENSDART00000064009ENSDART00000125323ENSDARG00000032653ENSDART00000042307ENSDART00000126608CIL_00062C_0002ENSMUSG00000030309ENSMUST00000072324ENSMUST00000111569ENSMUST00000122909ENSMUST00000127941ENSMUST00000132535ENSMUST00000139914ENSMUST00000151640ENSMUST00000154971ENSMUSG00000039985ENSMUST00000054080ENSMUST00000081956ENSMUST00000111562ENSMUST00000127063ENSMUST00000132696ENSMUST00000139355ENSMUST00000143963ENSMUST00000146457ENSMUSG00000085355ENSMUST00000047953ENSMUST00000154673ENSMUSG00000095288ENSMUST00000121643
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00062C_0001ENSDARG00000020749ENSDART00000040708ENSDART00000064009ENSDART00000125323ENSDARG00000032653ENSDART00000042307ENSDART00000126608CIL_00062C_0002ENSMUSG00000030309ENSMUST00000072324ENSMUST00000111569ENSMUST00000122909ENSMUST00000127941ENSMUST00000139914ENSMUST00000151640ENSMUSG00000039985ENSMUST00000054080ENSMUST00000081956ENSMUST00000111562ENSMUST00000132696ENSMUST00000143963ENSMUSG00000085355ENSMUST00000047953ENSMUST00000154673ENSMUSG00000095288ENSMUST00000121643
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000020749 ENSDART00000040708 N/A N/A N/A 1.471±0.62 N/A N/A 0.126±0.00 43.701±0.00 N/A N/A 0.154±0.00 N/A N/A N/A
ENSDART00000064009 N/A N/A N/A N/A N/A N/A 0.203±0.00 0.275±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000125323 N/A N/A N/A 1.496±0.43 N/A N/A 0.054±0.00 2.263±0.20 1.113±0.00 N/A 0.146±0.00 N/A N/A N/A
ENSDARG00000032653 ENSDART00000042307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.467±0.00 N/A N/A N/A
ENSDART00000126608 N/A N/A N/A 3.247±0.80 N/A N/A 8.252±1.07 1.877±0.04 1.237±0.00 N/A 0.163±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030309 ENSMUST00000072324 1.556±1.17 1.812±0.51 0.956±0.00 2.516±0.00 1.433±0.75 0.421±0.00 0.538±0.07 0.739±0.08 1.114±0.68 0.710±0.30 0.257±0.11 2.419±0.64 1.293±0.39 0.984±0.00
ENSMUST00000111569 1.290±0.28 0.606±0.15 1.815±0.10 1.215±0.51 0.818±0.20 0.901±0.17 0.493±0.16 0.789±0.38 0.878±0.60 0.396±0.14 0.527±0.14 2.223±1.24 0.820±0.19 2.771±0.49
ENSMUST00000122909 N/A N/A N/A N/A N/A N/A N/A N/A 0.449±0.00 N/A N/A N/A N/A N/A
ENSMUST00000127941 N/A 2.204±0.00 N/A N/A N/A N/A N/A N/A 0.369±0.18 N/A N/A N/A N/A N/A
ENSMUST00000132535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139914 N/A N/A N/A N/A N/A N/A N/A N/A 0.240±0.00 N/A N/A N/A N/A N/A
ENSMUST00000151640 N/A 3.421±0.00 N/A N/A N/A N/A N/A N/A 0.621±0.27 N/A N/A N/A N/A N/A
ENSMUST00000154971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039985 ENSMUST00000054080 2.180±1.19 N/A 8.764±1.42 12.165±8.85 0.958±0.48 1.384±0.34 0.652±0.08 1.591±0.55 3.983±3.42 1.803±0.47 0.399±0.15 5.300±4.29 8.718±6.28 1.226±0.64
ENSMUST00000081956 0.560±0.22 2.491±0.29 N/A 0.071±0.00 0.757±0.33 1.021±0.19 N/A 0.624±0.25 0.498±0.31 2.333±0.35 N/A 2.289±0.84 1.838±0.75 0.353±0.07
ENSMUST00000111562 N/A N/A N/A N/A N/A N/A N/A N/A 0.278±0.00 N/A N/A N/A N/A N/A
ENSMUST00000127063 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132696 N/A N/A N/A 0.300±0.00 N/A N/A N/A N/A N/A N/A 0.330±0.02 N/A N/A N/A
ENSMUST00000139355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143963 N/A N/A N/A 0.134±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085355 ENSMUST00000047953 1.035±0.68 2.373±0.64 N/A N/A 0.804±0.24 2.470±0.55 0.139±0.02 0.692±0.17 0.151±0.06 1.415±0.25 N/A 2.978±0.72 N/A 0.389±0.10
ENSMUST00000154673 N/A N/A N/A N/A N/A N/A N/A N/A 0.727±0.65 N/A N/A 3.048±0.00 3.239±0.00 N/A
ENSMUSG00000095288 ENSMUST00000121643 101.503±0.00 N/A N/A N/A 93.464±0.00 N/A N/A N/A N/A N/A N/A 130.717±189.79 N/A 11.953±0.00

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