C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00062Q_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000077818-ENSDARG00000077818 CGP 7955 21:27949110-28131715
GeneTranscriptPositionBiotype
ENSDARG00000067591 (pura)
purine-rich element binding protein A 		ENSDART00000097307 (pura-002) 28122424-28123519 protein_coding
ENSDART00000138017 (pura-001) 28118493-28123519 protein_coding
ENSDARG00000077818 (nrg2a)
neuregulin 2a 		ENSDART00000098696 (nrg2a-001) 27949110-28131714 protein_coding
ENSDART00000124826 (nrg2a-201) 27949112-28131715 protein_coding
ENSDART00000125652 (nrg2a-202) 27949112-28131715 protein_coding
ENSDART00000128237 (nrg2a-203) 27949112-28131715 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00062Q_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000158458-ENSG00000185129 CGP 9606 5:139846779-140125619
GeneTranscriptPositionBiotype
ENSG00000158458 (NRG2)
neuregulin 2 		ENST00000289409 (NRG2-002) 139847917-140043069 protein_coding
ENST00000289422 (NRG2-012) 139847649-140043147 protein_coding
ENST00000340391 (NRG2-006) 139847917-139904397 protein_coding
ENST00000358522 (NRG2-007) 139847917-140043069 protein_coding
ENST00000361474 (NRG2-001) 139847675-140043294 protein_coding
ENST00000378238 (NRG2-011) 139851753-140043069 nonsense_mediated_decay
ENST00000518130 (NRG2-010) 139869538-139904310 processed_transcript
ENST00000519478 (NRG2-009) 139869399-139871803 processed_transcript
ENST00000541337 (NRG2-201) 139846779-140043299 protein_coding
ENSG00000185129 (PURA)
purine-rich element binding protein A 		ENST00000331327 (PURA-001) 140114123-140125619 protein_coding
ENST00000502351 (PURA-003) 140112928-140114260 processed_transcript
ENST00000505703 (PURA-002) 140107777-140114313 processed_transcript
ENSG00000207317 (Y_RNA)
Y RNA 		ENST00000384587 (Y_RNA.1-732) 140019492-140019592 misc_RNA
ENSG00000245146 (LINC01024)
long intergenic non-protein coding RNA 1024 		ENST00000499203 (LINC01024-007) 140102922-140107643 antisense
ENST00000518790 (LINC01024-003) 140105600-140108565 antisense
ENST00000520928 (LINC01024-006) 140105302-140106482 antisense
ENST00000521133 (LINC01024-002) 140105425-140108588 antisense
ENST00000521563 (LINC01024-004) 140103840-140107649 antisense
ENST00000522747 (LINC01024-005) 140103833-140107466 antisense
ENST00000523452 (LINC01024-001) 140072857-140108630 antisense
ENSG00000250692 (CTB-35F21.4)
 ENST00000504413 (CTB-35F21.4-001) 139848290-139856389 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_00062Q_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000060275-ENSMUSG00000043991 CGP 10090 18:36017707-36301521
GeneTranscriptPositionBiotype
ENSMUSG00000043991 (Pura)
purine rich element binding protein A 		ENSMUST00000051301 (Pura-001) 36281097-36301521 protein_coding
ENSMUSG00000060275 (Nrg2)
neuregulin 2 		ENSMUST00000115705 (Nrg2-002) 36027396-36197232 protein_coding
ENSMUST00000115712 (Nrg2-003) 36017707-36197380 protein_coding
ENSMUST00000115713 (Nrg2-001) 36017707-36197380 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00062Q_0001ENSDARG00000067591ENSDART00000097307ENSDART00000138017ENSDARG00000077818ENSDART00000098696ENSDART00000124826ENSDART00000125652ENSDART00000128237CIL_00062Q_0002ENSG00000158458ENST00000289409ENST00000289422ENST00000340391ENST00000358522ENST00000361474ENST00000378238ENST00000518130ENST00000519478ENST00000541337ENSG00000185129ENST00000331327ENST00000502351ENST00000505703ENSG00000207317ENST00000384587ENSG00000245146ENST00000499203ENST00000518790ENST00000520928ENST00000521133ENST00000521563ENST00000522747ENST00000523452ENSG00000250692ENST00000504413CIL_00062Q_0003ENSMUSG00000043991ENSMUST00000051301ENSMUSG00000060275ENSMUST00000115705ENSMUST00000115712ENSMUST00000115713
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00062Q_0001ENSDARG00000067591ENSDART00000097307ENSDARG00000077818ENSDART00000098696ENSDART00000124826ENSDART00000125652ENSDART00000128237CIL_00062Q_0002ENSG00000158458ENST00000289409ENST00000289422ENST00000340391ENST00000361474ENST00000378238ENST00000518130ENST00000541337ENSG00000185129ENST00000331327ENSG00000207317ENST00000384587ENSG00000245146ENST00000499203ENST00000518790ENST00000521563ENST00000522747ENST00000523452ENSG00000250692ENST00000504413CIL_00062Q_0003ENSMUSG00000043991ENSMUST00000051301ENSMUSG00000060275ENSMUST00000115705ENSMUST00000115712ENSMUST00000115713
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000067591 ENSDART00000097307 N/A N/A N/A N/A N/A N/A N/A N/A 0.559±0.00 N/A N/A N/A N/A N/A
ENSDART00000138017 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000077818 ENSDART00000098696 N/A N/A N/A N/A N/A N/A N/A 0.491±0.40 0.115±0.00 N/A 0.195±0.00 N/A N/A N/A
ENSDART00000124826 N/A N/A N/A 1.445±0.00 N/A N/A N/A 0.414±0.14 N/A N/A N/A N/A N/A N/A
ENSDART00000125652 N/A N/A N/A N/A N/A N/A 2.238±0.00 0.276±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000128237 N/A N/A N/A N/A N/A N/A N/A 0.276±0.00 N/A N/A 0.614±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000158458 ENST00000289409 N/A N/A N/A 0.583±0.00 N/A N/A 0.415±0.00 N/A 0.076±0.00 N/A 1.274±0.00 N/A 0.427±0.25 N/A
ENST00000289422 N/A N/A N/A N/A 0.226±0.00 N/A N/A N/A N/A 0.081±0.00 N/A N/A N/A N/A
ENST00000340391 1.817±0.00 N/A 0.283±0.00 N/A N/A 0.609±0.00 N/A 0.317±0.00 0.061±0.00 N/A 1.102±0.00 3.675±2.98 0.177±0.01 0.493±0.00
ENST00000358522 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000361474 N/A N/A N/A 0.383±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000378238 N/A 0.542±0.00 N/A N/A 1.062±0.00 0.818±0.00 N/A N/A 0.494±0.00 N/A 0.690±0.00 0.838±0.75 N/A 0.729±0.00
ENST00000518130 N/A N/A N/A 0.820±0.00 N/A N/A 0.231±0.00 N/A N/A N/A 0.651±0.00 0.194±0.00 N/A 0.973±0.00
ENST00000519478 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541337 N/A 0.349±0.00 N/A N/A N/A 0.515±0.50 0.021±0.00 N/A N/A 0.150±0.00 N/A 0.026±0.00 0.124±0.00 N/A
ENSG00000185129 ENST00000331327 0.910±0.00 0.966±0.00 3.294±0.00 N/A 3.514±0.00 N/A 0.754±0.00 1.746±0.57 2.183±1.89 3.475±0.00 0.733±0.00 1.708±0.38 1.200±0.62 N/A
ENST00000502351 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505703 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000207317 ENST00000384587 N/A N/A N/A N/A 109.590±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000245146 ENST00000499203 0.172±0.00 N/A N/A 0.184±0.10 0.109±0.01 0.121±0.00 0.047±0.00 0.119±0.00 0.039±0.01 0.127±0.00 N/A 0.181±0.07 0.073±0.02 1.570±0.84
ENST00000518790 0.288±0.00 N/A N/A N/A 0.595±0.00 N/A N/A N/A N/A N/A 0.443±0.00 N/A 0.138±0.00 N/A
ENST00000520928 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521563 N/A N/A 0.640±0.00 N/A 0.356±0.00 0.577±0.00 N/A N/A N/A N/A N/A N/A 0.233±0.00 3.723±1.59
ENST00000522747 N/A N/A N/A N/A 0.388±0.00 N/A N/A N/A N/A N/A N/A 0.390±0.08 0.111±0.00 3.250±0.00
ENST00000523452 N/A N/A N/A N/A N/A N/A N/A N/A 0.884±0.00 N/A N/A N/A N/A N/A
ENSG00000250692 ENST00000504413 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.459±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000043991 ENSMUST00000051301 0.852±0.40 4.445±2.40 4.912±0.37 3.484±3.40 3.555±2.10 2.876±0.56 0.873±0.63 2.199±1.37 0.737±0.61 3.173±0.44 1.731±0.59 4.266±1.45 1.626±0.57 0.425±0.14
ENSMUSG00000060275 ENSMUST00000115705 N/A N/A N/A 2.792±0.00 N/A N/A N/A N/A N/A N/A 0.020±0.00 3.410±0.00 0.046±0.01 N/A
ENSMUST00000115712 N/A N/A N/A 0.578±0.18 N/A N/A N/A 0.329±0.00 N/A 0.586±0.00 0.035±0.02 1.004±0.20 0.113±0.05 0.096±0.03
ENSMUST00000115713 0.861±0.77 1.270±0.41 4.621±1.48 1.499±0.32 0.422±0.37 0.965±0.20 N/A 0.107±0.04 0.079±0.06 3.040±1.17 N/A 4.743±0.73 0.127±0.00 0.163±0.00

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