C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: purine rich element binding protein A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000051301 Pura-001 ENSMUSG00000043991 10090 + 18:36281097-36301521 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000051301
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000051301 0.852±0.40 4.445±2.40 4.912±0.37 3.484±3.40 3.555±2.10 2.876±0.56 0.873±0.63 2.199±1.37 0.737±0.61 3.173±0.44 1.731±0.59 4.266±1.45 1.626±0.57 0.425±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00062Q CIL_00062Q_0003 CGP 18:36017707-36301521

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000900 IDA translation repressor activity, nucleic acid binding
GO:0003677 IDA DNA binding
GO:0003690 IDA double-stranded DNA binding
GO:0003691 IEA double-stranded telomeric DNA binding
GO:0003697 IDA single-stranded DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005662 IDA DNA replication factor A complex
GO:0005737 IDA cytoplasm
GO:0006268 IEA DNA unwinding involved in DNA replication
GO:0006351 IEA transcription, DNA-templated
GO:0006915 NAS apoptotic process
GO:0007093 NAS mitotic cell cycle checkpoint
GO:0007399 IMP nervous system development
GO:0008134 IPI transcription factor binding
GO:0008283 NAS cell proliferation
GO:0008284 IMP positive regulation of cell proliferation
GO:0017148 IDA negative regulation of translation
GO:0030154 NAS cell differentiation
GO:0030425 IDA dendrite
GO:0032422 IDA purine-rich negative regulatory element binding
GO:0043025 IDA neuronal cell body
GO:0044822 IEA poly(A) RNA binding
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0046332 IDA SMAD binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000331327 PURA-001 protein_coding Homo_sapiens 0 6096
ENST00000333305 IGIP-002 protein_coding Homo_sapiens 0 3591
ENST00000395699 PURB-001 protein_coding Homo_sapiens 0 387
ENST00000502351 PURA-003 processed_transcript Homo_sapiens 0 322
ENST00000505703 PURA-002 processed_transcript Homo_sapiens 0 418

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