C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuregulin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378238 NRG2-011 ENSG00000158458 9606 - 5:139851753-140043069 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLiverMuscleOvaryTestisENST00000378238
Transcript ID Adrenal Breast Colon Liver Muscle Ovary Testis
ENST00000378238 0.542±0.00 1.062±0.00 0.818±0.00 0.494±0.00 0.690±0.00 0.838±0.75 0.729±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000540 CIL_000540_0001 CGP 5:139795821-140043299
CIL_00062Q CIL_00062Q_0002 CGP 5:139846779-140125619

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005102 TAS receptor binding
GO:0005515 IEA protein binding
GO:0005576 TAS extracellular region
GO:0005886 IEA plasma membrane
GO:0007165 TAS signal transduction
GO:0007173 TAS epidermal growth factor receptor signaling pathway
GO:0008083 IEA growth factor activity
GO:0008543 TAS fibroblast growth factor receptor signaling pathway
GO:0009790 IEA embryo development
GO:0016021 IEA integral component of membrane
GO:0038095 TAS Fc-epsilon receptor signaling pathway
GO:0045087 TAS innate immune response
GO:0048011 TAS neurotrophin TRK receptor signaling pathway
GO:0048015 TAS phosphatidylinositol-mediated signaling

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115713 Nrg2-001 protein_coding Mus_musculus 0 1600
ENSMUST00000115712 Nrg2-003 protein_coding Mus_musculus 0 1469
ENSMUST00000115705 Nrg2-002 protein_coding Mus_musculus 0 1057

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