C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00063H_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000026491-ENSDARG00000039133 CGP 7955 25:32549695-32680965
GeneTranscriptPositionBiotype
ENSDARG00000026491 (lamb1a)
laminin, beta 1a 		ENSDART00000035247 (lamb1a-201) 32549695-32566633 protein_coding
ENSDARG00000039133 (lamb4)
laminin, beta 4 		ENSDART00000058400 (lamb4-201) 32611176-32676545 protein_coding
ENSDART00000123330 (lamb4-202) 32611176-32676545 protein_coding
ENSDART00000153586 (lamb4-001) 32654052-32680965 protein_coding
ENSDARG00000089288 (lamb1a)
laminin, beta 1a 		ENSDART00000125680 (lamb1a-202) 32519231-32606949 protein_coding
CIL_00063H_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000091136-ENSG00000091128 CGP 9606 7:107923799-108130356
GeneTranscriptPositionBiotype
ENSG00000091128 (LAMB4)
laminin, beta 4 		ENST00000205386 (LAMB4-001) 108023548-108130355 protein_coding
ENST00000388781 (LAMB4-201) 108023551-108130356 protein_coding
ENST00000418464 (LAMB4-003) 108075537-108130355 protein_coding
ENST00000422975 (LAMB4-004) 108026561-108063899 protein_coding
ENST00000471677 (LAMB4-005) 108062397-108065858 retained_intron
ENST00000475469 (LAMB4-002) 108062470-108130356 retained_intron
ENST00000475572 (LAMB4-006) 108030945-108044270 processed_transcript
ENST00000483484 (LAMB4-007) 108023811-108037462 processed_transcript
ENSG00000091136 (LAMB1)
laminin, beta 1 		ENST00000222399 (LAMB1-001) 107923818-108003255 protein_coding
ENST00000393559 (LAMB1-006) 107998431-108003160 protein_coding
ENST00000393560 (LAMB1-002) 107959506-108003187 protein_coding
ENST00000393561 (LAMB1-003) 107923803-108002027 protein_coding
ENST00000439976 (LAMB1-005) 107998413-108003176 protein_coding
ENST00000468518 (LAMB1-013) 107931357-107932624 processed_transcript
ENST00000468999 (LAMB1-009) 107937090-107940564 processed_transcript
ENST00000470995 (LAMB1-010) 107935374-107937163 processed_transcript
ENST00000472714 (LAMB1-004) 107923799-107929977 retained_intron
ENST00000474380 (LAMB1-012) 107929449-107937159 processed_transcript
ENST00000476039 (LAMB1-008) 107942399-107953649 processed_transcript
ENST00000479448 (LAMB1-007) 107951101-107952090 processed_transcript
ENST00000491196 (LAMB1-011) 107935356-107937170 processed_transcript
ENSG00000091140 (DLD)
dihydrolipoamide dehydrogenase 		ENST00000205402 (DLD-001) 107890970-107921203 protein_coding
ENST00000415325 (DLD-002) 107891164-107919593 nonsense_mediated_decay
ENST00000417551 (DLD-006) 107891164-107931730 nonsense_mediated_decay
ENST00000437604 (DLD-005) 107891174-107919655 protein_coding
ENST00000440410 (DLD-003) 107891173-107919713 protein_coding
ENST00000450038 (DLD-013) 107891186-107905058 nonsense_mediated_decay
ENST00000451081 (DLD-004) 107891186-107915595 nonsense_mediated_decay
ENST00000453354 (DLD-011) 107891186-107904997 processed_transcript
ENST00000460577 (DLD-010) 107891217-107903776 retained_intron
ENST00000478414 (DLD-015) 107903503-107905763 retained_intron
ENST00000485066 (DLD-007) 107891162-107893554 retained_intron
ENST00000489184 (DLD-014) 107904668-107906369 retained_intron
ENST00000494441 (DLD-008) 107891430-107905389 processed_transcript
ENSG00000238297 (U3)
Small nucleolar RNA U3 		ENST00000458938 (U3.1-248) 107999791-107999982 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00063H_0001ENSDARG00000026491ENSDART00000035247ENSDARG00000039133ENSDART00000058400ENSDART00000123330ENSDART00000153586ENSDARG00000089288ENSDART00000125680CIL_00063H_0002ENSG00000091128ENST00000205386ENST00000388781ENST00000418464ENST00000422975ENST00000471677ENST00000475469ENST00000475572ENST00000483484ENSG00000091136ENST00000222399ENST00000393559ENST00000393560ENST00000393561ENST00000439976ENST00000468518ENST00000468999ENST00000470995ENST00000472714ENST00000474380ENST00000476039ENST00000479448ENST00000491196ENSG00000091140ENST00000205402ENST00000415325ENST00000417551ENST00000437604ENST00000440410ENST00000450038ENST00000451081ENST00000453354ENST00000460577ENST00000478414ENST00000485066ENST00000489184ENST00000494441ENSG00000238297ENST00000458938
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00063H_0001ENSDARG00000026491ENSDART00000035247ENSDARG00000039133ENSDART00000058400ENSDART00000123330ENSDARG00000089288ENSDART00000125680CIL_00063H_0002ENSG00000091128ENST00000205386ENST00000388781ENST00000418464ENST00000422975ENST00000471677ENST00000475469ENST00000475572ENST00000483484ENSG00000091136ENST00000222399ENST00000393560ENST00000393561ENSG00000091140ENST00000205402ENST00000415325ENST00000417551ENST00000437604ENST00000440410ENSG00000238297ENST00000458938
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000026491 ENSDART00000035247 N/A N/A N/A 2.499±1.07 N/A N/A 16.348±10.45 19.895±12.31 0.189±0.00 N/A 1.047±0.00 N/A N/A N/A
ENSDARG00000039133 ENSDART00000058400 N/A N/A N/A 0.217±0.11 N/A N/A 0.008±0.00 0.144±0.00 0.007±0.00 N/A 0.005±0.00 N/A N/A N/A
ENSDART00000123330 N/A N/A N/A 0.325±0.00 N/A N/A 0.065±0.06 0.101±0.00 0.007±0.00 N/A 0.005±0.00 N/A N/A N/A
ENSDART00000153586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000089288 ENSDART00000125680 N/A N/A N/A 1.067±0.39 N/A N/A 4.809±0.23 1.184±0.00 0.214±0.00 N/A 0.975±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000091128 ENST00000205386 N/A N/A N/A N/A N/A 0.004±0.00 N/A 0.077±0.00 N/A N/A N/A N/A 1.909±0.97 N/A
ENST00000388781 N/A N/A N/A N/A N/A 0.004±0.00 N/A 0.066±0.00 N/A N/A N/A N/A N/A N/A
ENST00000418464 0.047±0.00 0.109±0.00 0.098±0.00 0.007±0.00 0.017±0.00 0.074±0.00 0.068±0.02 0.046±0.00 0.026±0.00 0.022±0.00 0.005±0.00 0.024±0.01 N/A N/A
ENST00000422975 N/A 0.020±0.00 0.113±0.00 0.029±0.00 0.024±0.00 N/A 0.023±0.00 N/A 0.051±0.00 N/A N/A 0.016±0.00 N/A 0.488±0.32
ENST00000471677 0.086±0.00 N/A 0.341±0.00 N/A N/A N/A 0.138±0.00 0.508±0.00 N/A N/A N/A 0.024±0.00 N/A N/A
ENST00000475469 N/A N/A N/A N/A 0.027±0.00 N/A N/A N/A N/A N/A N/A 0.016±0.00 N/A N/A
ENST00000475572 N/A N/A N/A N/A N/A 0.133±0.00 N/A N/A N/A N/A N/A 0.050±0.00 N/A 0.320±0.00
ENST00000483484 0.030±0.00 N/A N/A N/A N/A N/A 0.082±0.00 N/A N/A N/A N/A 0.018±0.00 2.569±0.00 0.282±0.00
ENSG00000091136 ENST00000222399 48.991±0.00 10.883±0.00 N/A N/A 9.543±1.41 21.707±15.29 20.407±0.00 34.241±0.00 6.405±2.68 17.852±13.09 2.999±0.00 15.869±7.27 48.386±12.35 25.754±0.00
ENST00000393559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000393560 N/A N/A 10.063±0.00 N/A N/A N/A 5.066±0.00 N/A N/A 6.626±0.00 N/A N/A N/A N/A
ENST00000393561 N/A N/A 8.327±0.00 1.717±0.00 N/A 5.468±0.00 2.522±0.00 N/A 4.107±0.00 3.038±0.00 1.943±0.00 10.707±0.00 38.680±0.00 4.797±0.00
ENST00000439976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470995 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474380 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491196 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000091140 ENST00000205402 N/A 6.317±0.00 N/A 7.768±1.01 6.256±0.00 7.030±0.00 6.836±2.77 7.556±3.94 5.475±1.54 N/A 5.611±0.20 7.969±1.39 N/A 11.282±0.00
ENST00000415325 N/A N/A N/A 11.524±0.00 N/A N/A N/A N/A N/A N/A N/A 25.895±0.00 N/A 18.873±0.00
ENST00000417551 N/A N/A 11.926±0.00 N/A N/A N/A 13.997±0.00 11.483±0.00 N/A N/A 14.077±0.00 12.025±0.64 N/A N/A
ENST00000437604 N/A N/A N/A 7.135±0.00 13.405±0.00 N/A 32.737±0.00 4.192±0.00 6.359±0.00 N/A 4.463±0.00 N/A N/A N/A
ENST00000440410 N/A 14.483±0.00 N/A 6.333±0.74 19.559±0.00 N/A 43.901±0.00 29.885±0.00 11.536±0.00 7.145±0.00 16.451±0.00 N/A N/A N/A
ENST00000450038 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460577 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478414 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489184 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000238297 ENST00000458938 0.254±0.00 N/A N/A N/A N/A N/A N/A 0.254±0.00 N/A N/A N/A N/A N/A N/A

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