C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000648_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000031108-ENSDARG00000031108 CGP 7955 1:22694787-23124646
GeneTranscriptPositionBiotype
ENSDARG00000015266 (mab21l2)
mab-21-like 2 		ENSDART00000014608 (mab21l2-001) 22850438-22852294 protein_coding
ENSDARG00000031108 (lrba)
LPS-responsive vesicle trafficking, beach and anchor containing 		ENSDART00000025224 (lrba-201) 22694787-23124646 protein_coding
ENSDART00000142740 (lrba-002) 23038402-23124616 protein_coding
ENSDART00000146960 (lrba-001) 22749492-23029334 protein_coding
CIL_000648_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198589-ENSG00000198589 CGP 9606 4:150264531-151015727
GeneTranscriptPositionBiotype
ENSG00000181541 (MAB21L2)
mab-21-like 2 (C. elegans) 		ENST00000317605 (MAB21L2-001) 150581922-150584693 protein_coding
ENSG00000183432 (ZBTB8OSP1)
zinc finger and BTB domain containing 8 opposite strand pseudogene 1 		ENST00000342688 (ZBTB8OSP1-001) 150720981-150721478 processed_pseudogene
ENSG00000198589 (LRBA)
LPS-responsive vesicle trafficking, beach and anchor containing 		ENST00000357115 (LRBA-002) 150264659-151015497 protein_coding
ENST00000502839 (LRBA-011) 150840540-150848887 protein_coding
ENST00000503716 (LRBA-004) 150264659-150581722 processed_transcript
ENST00000507224 (LRBA-008) 150314723-151015277 protein_coding
ENST00000508396 (LRBA-012) 150683603-150683963 processed_transcript
ENST00000508606 (LRBA-014) 150265566-150302711 protein_coding
ENST00000509835 (LRBA-003) 150264661-150849537 protein_coding
ENST00000510157 (LRBA-010) 150265026-150315634 retained_intron
ENST00000510413 (LRBA-001) 150264531-151015267 protein_coding
ENST00000510841 (LRBA-006) 151012829-151015727 retained_intron
ENST00000513021 (LRBA-013) 150490957-150679667 processed_transcript
ENST00000514435 (LRBA-007) 151012805-151015284 retained_intron
ENST00000515096 (LRBA-009) 150264659-150311369 retained_intron
ENSG00000221235 (AC110813.1)
 ENST00000408308 (AC110813.1-201) 150639756-150639866 miRNA
ENSG00000248521 (RP11-174F8.1)
 ENST00000514501 (RP11-174F8.1-001) 150422645-150423642 processed_pseudogene
ENSG00000252451 (RNA5SP168)
RNA, 5S ribosomal pseudogene 168 		ENST00000516642 (RNA5SP168-201) 150970671-150970782 rRNA
CIL_000648_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028080-ENSMUSG00000028080 CGP 10090 3:86224690-86782693
GeneTranscriptPositionBiotype
ENSMUSG00000028080 (Lrba)
LPS-responsive beige-like anchor 		ENSMUST00000107635 (Lrba-201) 86224690-86782693 protein_coding
ENSMUSG00000057777 (Mab21l2)
mab-21-like 2 (C. elegans) 		ENSMUST00000077524 (Mab21l2-201) 86545581-86548283 protein_coding
ENSMUSG00000094392 (Gm3788)
predicted gene 3788 		ENSMUST00000119949 (Gm3788-001) 86672033-86672168 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000648_0001ENSDARG00000015266ENSDART00000014608ENSDARG00000031108ENSDART00000025224ENSDART00000142740ENSDART00000146960CIL_000648_0002ENSG00000181541ENST00000317605ENSG00000183432ENST00000342688ENSG00000198589ENST00000357115ENST00000502839ENST00000503716ENST00000507224ENST00000508396ENST00000508606ENST00000509835ENST00000510157ENST00000510413ENST00000510841ENST00000513021ENST00000514435ENST00000515096ENSG00000221235ENST00000408308ENSG00000248521ENST00000514501ENSG00000252451ENST00000516642CIL_000648_0003ENSMUSG00000028080ENSMUST00000107635ENSMUSG00000057777ENSMUST00000077524ENSMUSG00000094392ENSMUST00000119949
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000648_0001ENSDARG00000015266ENSDART00000014608ENSDARG00000031108ENSDART00000025224CIL_000648_0002ENSG00000181541ENST00000317605ENSG00000183432ENST00000342688ENSG00000198589ENST00000357115ENST00000503716ENST00000507224ENST00000509835ENST00000510157ENST00000510413ENSG00000221235ENST00000408308ENSG00000248521ENST00000514501ENSG00000252451ENST00000516642CIL_000648_0003ENSMUSG00000028080ENSMUST00000107635ENSMUSG00000057777ENSMUST00000077524ENSMUSG00000094392ENSMUST00000119949
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000015266 ENSDART00000014608 N/A N/A N/A 11.406±1.49 N/A N/A N/A 0.073±0.00 0.044±0.00 N/A 1.007±0.00 N/A N/A N/A
ENSDARG00000031108 ENSDART00000025224 N/A N/A N/A 2.085±1.04 N/A N/A 1.717±0.42 6.558±5.25 0.291±0.00 N/A N/A N/A N/A N/A
ENSDART00000142740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000146960 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000181541 ENST00000317605 0.013±0.00 0.150±0.00 0.530±0.00 0.130±0.06 2.514±2.47 81.815±75.64 0.023±0.00 0.158±0.05 0.460±0.12 0.448±0.28 0.148±0.14 0.128±0.18 0.067±0.06 0.056±0.00
ENSG00000183432 ENST00000342688 N/A 0.045±0.00 0.990±0.00 N/A N/A 0.101±0.00 N/A N/A N/A N/A N/A N/A N/A 0.041±0.00
ENSG00000198589 ENST00000357115 0.491±0.00 N/A 1.421±0.00 0.620±0.00 0.503±0.00 4.293±0.00 0.673±0.00 N/A 0.946±0.28 1.237±0.00 N/A 0.439±0.00 N/A 0.869±0.00
ENST00000502839 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503716 N/A N/A N/A N/A N/A 2.584±0.00 N/A 2.550±0.00 N/A N/A N/A N/A N/A N/A
ENST00000507224 N/A N/A 8.927±0.00 2.659±0.00 5.504±0.00 9.483±0.00 1.316±0.00 2.326±0.00 7.318±0.00 5.458±0.00 1.169±0.00 4.109±0.00 N/A N/A
ENST00000508396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508606 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509835 1.871±0.00 2.854±0.00 N/A 1.349±0.39 2.616±0.32 1.938±0.00 1.429±0.58 5.647±0.00 1.170±0.00 2.096±0.00 0.943±0.00 4.058±1.77 1.231±0.91 4.948±0.29
ENST00000510157 1.888±0.00 5.331±0.00 N/A N/A 2.427±0.00 5.545±0.00 N/A 7.519±0.00 N/A N/A N/A N/A N/A 5.170±0.00
ENST00000510413 N/A 0.932±0.00 N/A N/A N/A 0.643±0.00 2.021±0.00 2.271±0.00 N/A N/A 0.747±0.00 1.814±0.00 0.434±0.00 1.479±0.00
ENST00000510841 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515096 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000221235 ENST00000408308 0.939±0.00 1.635±0.00 N/A 0.944±0.00 0.504±0.00 0.088±0.00 0.467±0.00 2.040±0.00 0.886±0.00 0.217±0.00 0.100±0.00 N/A N/A 1.321±0.00
ENSG00000248521 ENST00000514501 N/A 0.040±0.00 0.050±0.00 0.170±0.00 0.791±0.00 0.442±0.00 0.135±0.00 0.021±0.00 0.255±0.00 0.849±0.00 0.017±0.00 0.124±0.13 N/A 0.058±0.02
ENSG00000252451 ENST00000516642 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.863±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028080 ENSMUST00000107635 3.094±0.93 2.817±0.77 1.743±0.32 1.970±0.78 3.300±0.98 10.618±0.93 1.348±0.74 6.900±2.92 1.801±0.74 3.879±1.01 2.299±0.80 4.515±0.92 2.541±0.33 1.485±0.29
ENSMUSG00000057777 ENSMUST00000077524 0.053±0.00 4.958±0.00 N/A 31.489±13.74 0.366±0.03 10.730±2.30 0.138±0.05 0.253±0.12 0.384±0.25 0.195±0.05 0.014±0.01 0.394±0.20 1.480±2.12 0.047±0.00
ENSMUSG00000094392 ENSMUST00000119949 N/A N/A 7.831±0.00 8.111±0.00 N/A N/A N/A N/A N/A N/A 3.013±0.00 73.608±4.22 47.808±56.08 N/A

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