C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LPS-responsive vesicle trafficking, beach and anchor containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000509835 LRBA-003 ENSG00000198589 9606 - 4:150264661-150849537 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000509835
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000509835 1.871±0.00 2.854±0.00 1.349±0.39 2.616±0.32 1.938±0.00 1.429±0.58 5.647±0.00 1.170±0.00 2.096±0.00 0.943±0.00 4.058±1.77 1.231±0.91 4.948±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008VX CIL_0008VX_0001 VISTA 4:149875321-150478147
CIL_00088B CIL_00088B_0001 VISTA 4:150067205-150668217
CIL_000648 CIL_000648_0002 CGP 4:150264531-151015727

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107635 Lrba-201 protein_coding Mus_musculus 0 5792

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