C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00064F_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000075765-ENSDARG00000073853 CGP 7955 20:52672610-52789070
GeneTranscriptPositionBiotype
ENSDARG00000073853 (arhgap39)
Rho GTPase activating protein 39 		ENSDART00000113684 (arhgap39-201) 52685996-52789070 protein_coding
ENSDART00000133912 (arhgap39-001) 52784407-52789070 protein_coding
ENSDARG00000075765 (C20H8orf82)
chromosome 8 open reading frame 82 		ENSDART00000109735 (C20H8orf82-002) 52672617-52678420 protein_coding
ENSDART00000132941 (C20H8orf82-001) 52672610-52678448 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_00064F_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000213563-ENSG00000147799 CGP 9606 8:144525733-144605816
GeneTranscriptPositionBiotype
ENSG00000147799 (ARHGAP39)
Rho GTPase activating protein 39 		ENST00000276826 (ARHGAP39-001) 144529179-144605816 protein_coding
ENST00000377307 (ARHGAP39-002) 144529179-144605699 protein_coding
ENST00000528810 (ARHGAP39-003) 144537758-144545664 processed_transcript
ENSG00000213563 (C8orf82)
chromosome 8 open reading frame 82 		ENST00000313465 (C8orf82-002) 144526219-144529092 protein_coding
ENST00000524821 (C8orf82-001) 144525733-144529132 protein_coding
ENST00000527462 (C8orf82-004) 144528373-144529062 protein_coding
ENST00000532827 (C8orf82-005) 144527324-144528556 protein_coding
ENST00000534680 (C8orf82-003) 144526252-144529132 nonsense_mediated_decay
ENSG00000254402 (LRRC24)
leucine rich repeat containing 24 		ENST00000529415 (LRRC24-001) 144522377-144527018 protein_coding
ENST00000533758 (LRRC24-002) 144522439-144527032 protein_coding
ENSG00000255456 (CTD-2517M22.9)
 ENST00000529377 (CTD-2517M22.9-001) 144584040-144586488 antisense

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00064F_0001ENSDARG00000073853ENSDART00000113684ENSDART00000133912ENSDARG00000075765ENSDART00000109735ENSDART00000132941CIL_00064F_0002ENSG00000147799ENST00000276826ENST00000377307ENST00000528810ENSG00000213563ENST00000313465ENST00000524821ENST00000527462ENST00000532827ENST00000534680ENSG00000254402ENST00000529415ENST00000533758ENSG00000255456ENST00000529377
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00064F_0001ENSDARG00000073853ENSDART00000113684ENSDARG00000075765ENSDART00000109735ENSDART00000132941CIL_00064F_0002ENSG00000147799ENST00000276826ENST00000377307ENST00000528810ENSG00000213563ENST00000313465ENST00000524821ENST00000534680ENSG00000254402ENST00000529415ENST00000533758ENSG00000255456ENST00000529377
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000073853 ENSDART00000113684 N/A N/A N/A N/A N/A N/A 0.030±0.01 N/A 0.141±0.00 N/A 0.346±0.00 N/A N/A N/A
ENSDART00000133912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000075765 ENSDART00000109735 N/A N/A N/A 9.422±3.49 N/A N/A 5.064±0.00 1.199±0.00 0.717±0.00 N/A 4.150±0.00 N/A N/A N/A
ENSDART00000132941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.680±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000147799 ENST00000276826 0.445±0.00 0.211±0.00 N/A 5.522±4.51 0.894±0.00 0.527±0.44 0.055±0.00 N/A 0.114±0.00 0.965±0.91 0.039±0.00 0.363±0.00 0.153±0.00 11.519±0.00
ENST00000377307 N/A 0.484±0.00 N/A 1.438±1.04 0.494±0.15 0.312±0.08 0.510±0.00 2.083±0.00 0.168±0.00 1.193±0.00 N/A 3.484±3.01 0.984±0.37 13.811±1.84
ENST00000528810 N/A N/A N/A N/A N/A N/A N/A 1.188±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000213563 ENST00000313465 9.526±0.00 9.317±0.00 1.534±0.00 N/A 13.333±0.00 7.277±0.00 5.027±4.17 8.213±3.65 18.536±0.00 3.557±2.67 6.248±0.00 11.512±0.00 4.238±0.14 13.826±0.00
ENST00000524821 N/A N/A N/A 1.142±0.00 2.772±0.00 1.678±0.79 N/A 1.594±0.00 0.642±0.00 N/A 1.298±0.00 N/A N/A N/A
ENST00000527462 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532827 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534680 9.012±0.00 10.932±0.00 N/A N/A 9.786±0.00 6.085±0.00 17.897±0.00 13.205±7.08 14.985±11.85 13.974±0.00 7.692±4.49 19.091±12.49 10.359±2.14 13.041±0.00
ENSG00000254402 ENST00000529415 N/A N/A N/A 1.313±0.00 N/A N/A N/A N/A N/A 1.287±0.00 N/A N/A 4.563±0.00 N/A
ENST00000533758 N/A 8.657±0.00 N/A N/A N/A N/A N/A N/A N/A 8.030±0.00 N/A 6.620±4.63 N/A 11.526±0.00
ENSG00000255456 ENST00000529377 N/A 0.236±0.00 N/A 0.083±0.00 0.075±0.00 N/A N/A 0.116±0.00 N/A N/A N/A 0.056±0.00 N/A 0.037±0.00

Loading