C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00064F_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000075765-ENSDARG00000073853 CGP 7955 20:52672610-52789070
GeneTranscriptPositionBiotype
ENSDARG00000073853 (arhgap39)
Rho GTPase activating protein 39
ENSDART00000113684 (arhgap39-201) 52685996-52789070 protein_coding
ENSDART00000133912 (arhgap39-001) 52784407-52789070 protein_coding
ENSDARG00000075765 (C20H8orf82)
chromosome 8 open reading frame 82
ENSDART00000109735 (C20H8orf82-002) 52672617-52678420 protein_coding
ENSDART00000132941 (C20H8orf82-001) 52672610-52678448 protein_coding
CIL_00064F_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000213563-ENSG00000147799 CGP 9606 8:144525733-144605816
GeneTranscriptPositionBiotype
ENSG00000147799 (ARHGAP39)
Rho GTPase activating protein 39
ENST00000276826 (ARHGAP39-001) 144529179-144605816 protein_coding
ENST00000377307 (ARHGAP39-002) 144529179-144605699 protein_coding
ENST00000528810 (ARHGAP39-003) 144537758-144545664 processed_transcript
ENSG00000213563 (C8orf82)
chromosome 8 open reading frame 82
ENST00000313465 (C8orf82-002) 144526219-144529092 protein_coding
ENST00000524821 (C8orf82-001) 144525733-144529132 protein_coding
ENST00000527462 (C8orf82-004) 144528373-144529062 protein_coding
ENST00000532827 (C8orf82-005) 144527324-144528556 protein_coding
ENST00000534680 (C8orf82-003) 144526252-144529132 nonsense_mediated_decay
ENSG00000254402 (LRRC24)
leucine rich repeat containing 24
ENST00000529415 (LRRC24-001) 144522377-144527018 protein_coding
ENST00000533758 (LRRC24-002) 144522439-144527032 protein_coding
ENSG00000255456 (CTD-2517M22.9)
ENST00000529377 (CTD-2517M22.9-001) 144584040-144586488 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00064F_0001ENSDARG00000073853ENSDART00000113684ENSDART00000133912ENSDARG00000075765ENSDART00000109735ENSDART00000132941CIL_00064F_0002ENSG00000147799ENST00000276826ENST00000377307ENST00000528810ENSG00000213563ENST00000313465ENST00000524821ENST00000527462ENST00000532827ENST00000534680ENSG00000254402ENST00000529415ENST00000533758ENSG00000255456ENST00000529377
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00064F_0001ENSDARG00000073853ENSDART00000113684ENSDARG00000075765ENSDART00000109735ENSDART00000132941CIL_00064F_0002ENSG00000147799ENST00000276826ENST00000377307ENST00000528810ENSG00000213563ENST00000313465ENST00000524821ENST00000534680ENSG00000254402ENST00000529415ENST00000533758ENSG00000255456ENST00000529377
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000073853 ENSDART00000113684 N/A N/A N/A N/A N/A N/A 0.030±0.01 N/A 0.141±0.00 N/A 0.346±0.00 N/A N/A N/A
ENSDART00000133912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000075765 ENSDART00000109735 N/A N/A N/A 9.422±3.49 N/A N/A 5.064±0.00 1.199±0.00 0.717±0.00 N/A 4.150±0.00 N/A N/A N/A
ENSDART00000132941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.680±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000147799 ENST00000276826 0.445±0.00 0.211±0.00 N/A 5.522±4.51 0.894±0.00 0.527±0.44 0.055±0.00 N/A 0.114±0.00 0.965±0.91 0.039±0.00 0.363±0.00 0.153±0.00 11.519±0.00
ENST00000377307 N/A 0.484±0.00 N/A 1.438±1.04 0.494±0.15 0.312±0.08 0.510±0.00 2.083±0.00 0.168±0.00 1.193±0.00 N/A 3.484±3.01 0.984±0.37 13.811±1.84
ENST00000528810 N/A N/A N/A N/A N/A N/A N/A 1.188±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000213563 ENST00000313465 9.526±0.00 9.317±0.00 1.534±0.00 N/A 13.333±0.00 7.277±0.00 5.027±4.17 8.213±3.65 18.536±0.00 3.557±2.67 6.248±0.00 11.512±0.00 4.238±0.14 13.826±0.00
ENST00000524821 N/A N/A N/A 1.142±0.00 2.772±0.00 1.678±0.79 N/A 1.594±0.00 0.642±0.00 N/A 1.298±0.00 N/A N/A N/A
ENST00000527462 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532827 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534680 9.012±0.00 10.932±0.00 N/A N/A 9.786±0.00 6.085±0.00 17.897±0.00 13.205±7.08 14.985±11.85 13.974±0.00 7.692±4.49 19.091±12.49 10.359±2.14 13.041±0.00
ENSG00000254402 ENST00000529415 N/A N/A N/A 1.313±0.00 N/A N/A N/A N/A N/A 1.287±0.00 N/A N/A 4.563±0.00 N/A
ENST00000533758 N/A 8.657±0.00 N/A N/A N/A N/A N/A N/A N/A 8.030±0.00 N/A 6.620±4.63 N/A 11.526±0.00
ENSG00000255456 ENST00000529377 N/A 0.236±0.00 N/A 0.083±0.00 0.075±0.00 N/A N/A 0.116±0.00 N/A N/A N/A 0.056±0.00 N/A 0.037±0.00

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