C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 39
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000113684 arhgap39-201 ENSDARG00000073853 7955 + 20:52685996-52789070 protein_coding

Danio rerio EnsemblZv9

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverMuscleENSDART00000113684
Transcript ID Heart Liver Muscle
ENSDART00000113684 0.030±0.01 0.141±0.00 0.346±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064F CIL_00064F_0001 CGP 20:52672610-52789070

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005856 IEA cytoskeleton
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036176 Arhgap39-002 protein_coding Mus_musculus 0 503
ENSMUST00000077821 Arhgap39-001 protein_coding Mus_musculus 0 965
ENSMUST00000177011 Arhgap39-003 retained_intron Mus_musculus 0 503
ENST00000276826 ARHGAP39-001 protein_coding Homo_sapiens 0 1083
ENST00000377307 ARHGAP39-002 protein_coding Homo_sapiens 0 555
ENST00000528810 ARHGAP39-003 processed_transcript Homo_sapiens 0 350

Loading