C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 9330159F19 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000092627 9330159F19Rik-201 ENSMUSG00000004360 10090 + 10:29211643-29230779 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000092627
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000092627 0.510±0.11 0.258±0.10 1.658±0.15 12.038±7.48 0.372±0.17 0.159±0.07 0.099±0.07 0.052±0.02 0.017±0.01 0.447±0.16 2.764±1.07 0.150±0.06 0.014±0.01 0.064±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001EL CIL_0001EL_0003 CGP 10:29143996-29230779
CIL_00065S CIL_00065S_0002 CGP 10:29211643-29346661

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000187762 TMEM38A-001 protein_coding Homo_sapiens 0.0000000001 73
ENST00000368281 KIAA0408-001 retained_intron Homo_sapiens 0 651
ENST00000465254 KIAA0408-002 protein_coding Homo_sapiens 0 514
ENST00000473298 SOGA3-002 nonsense_mediated_decay Homo_sapiens 0 880
ENST00000481848 SOGA3-001 nonsense_mediated_decay Homo_sapiens 0 880
ENST00000483725 KIAA0408-003 protein_coding Homo_sapiens 0 880
ENST00000556132 SOGA3-201 protein_coding Homo_sapiens 0 880

Loading