C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SOGA family member 3a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000156765 soga3a-001 ENSDARG00000097245 7955 + 16:6440245-6487240 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSDART00000156765
Transcript ID Brain
ENSDART00000156765 5.230±1.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001EL CIL_0001EL_0001 CGP 16:6440245-6487240

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005615 IEA extracellular space
GO:0010506 IEA regulation of autophagy

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000086693 Mtcl1-001 protein_coding Mus_musculus 0.0005 53
ENSMUST00000097291 Mtcl1-002 protein_coding Mus_musculus 0.0005 53
ENSMUST00000145347 Mtcl1-003 protein_coding Mus_musculus 0.0004 53
ENSMUST00000177034 Mtcl1-011 protein_coding Mus_musculus 0.0004 53

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