C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000661_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000148843-ENSG00000138172 CGP 9606 10:103396648-103452402
GeneTranscriptPositionBiotype
ENSG00000138172 (CALHM2)
calcium homeostasis modulator 2 		ENST00000260743 (CALHM2-002) 103446789-103452318 protein_coding
ENST00000369788 (CALHM2-001) 103446786-103452402 protein_coding
ENST00000461631 (CALHM2-003) 103450296-103452391 processed_transcript
ENST00000463878 (CALHM2-007) 103449699-103452336 processed_transcript
ENST00000474797 (CALHM2-006) 103450412-103451588 processed_transcript
ENST00000480642 (CALHM2-004) 103450025-103452287 processed_transcript
ENST00000494180 (CALHM2-005) 103449625-103451572 processed_transcript
ENSG00000148843 (PDCD11)
programmed cell death 11 		ENST00000369797 (PDCD11-001) 103396648-103446292 protein_coding
ENST00000466959 (PDCD11-005) 103433993-103434702 retained_intron
ENST00000471061 (PDCD11-003) 103403227-103405372 retained_intron
ENST00000478543 (PDCD11-004) 103444313-103445724 retained_intron
ENST00000490787 (PDCD11-006) 103424984-103425084 processed_transcript
ENST00000493610 (PDCD11-002) 103396650-103405075 nonsense_mediated_decay
ENSG00000273485 (RP11-225H22.7)
 ENST00000608063 (RP11-225H22.7-001) 103450196-103450852 antisense
CIL_000661_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025047-ENSMUSG00000033033 CGP 10090 19:47090766-47138294
GeneTranscriptPositionBiotype
ENSMUSG00000025047 (Pdcd11)
programmed cell death 11 		ENSMUST00000072141 (Pdcd11-201) 47090766-47131143 protein_coding
ENSMUSG00000033033 (Calhm2)
calcium homeostasis modulator 2 		ENSMUST00000035822 (Calhm2-001) 47131823-47138294 protein_coding
ENSMUST00000140512 (Calhm2-002) 47105353-47138294 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000661_0001ENSG00000138172ENST00000260743ENST00000369788ENST00000461631ENST00000463878ENST00000474797ENST00000480642ENST00000494180ENSG00000148843ENST00000369797ENST00000466959ENST00000471061ENST00000478543ENST00000490787ENST00000493610ENSG00000273485ENST00000608063CIL_000661_0002ENSMUSG00000025047ENSMUST00000072141ENSMUSG00000033033ENSMUST00000035822ENSMUST00000140512
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000661_0001ENSG00000138172ENST00000260743ENST00000369788ENST00000480642ENST00000494180ENSG00000148843ENST00000369797ENST00000478543ENSG00000273485ENST00000608063CIL_000661_0002ENSMUSG00000025047ENSMUST00000072141ENSMUSG00000033033ENSMUST00000035822
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138172 ENST00000260743 9.033±0.00 14.139±0.00 N/A 1.127±0.14 12.294±0.00 5.595±5.16 3.282±0.00 3.934±0.00 2.193±0.38 5.727±4.63 2.000±0.00 11.784±9.85 9.270±3.83 12.205±0.00
ENST00000369788 6.461±0.00 8.037±0.00 N/A N/A 2.624±0.00 6.399±0.00 1.684±0.00 N/A N/A 2.423±0.92 3.226±0.00 11.063±7.21 5.827±1.18 6.691±1.97
ENST00000461631 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463878 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480642 N/A N/A 0.284±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494180 N/A N/A N/A N/A N/A 0.449±0.00 1.046±0.00 N/A N/A N/A N/A 1.059±0.00 N/A N/A
ENSG00000148843 ENST00000369797 3.490±0.00 3.349±0.00 1.132±0.00 1.225±0.98 2.281±1.50 3.336±1.41 2.335±0.00 2.942±2.70 2.768±0.00 2.226±1.37 5.798±5.02 7.245±3.72 4.612±0.63 13.028±0.94
ENST00000466959 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.661±0.00 N/A N/A N/A
ENST00000490787 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000273485 ENST00000608063 7.562±0.00 6.932±0.00 N/A 0.642±0.00 N/A 0.579±0.00 N/A 2.048±0.00 N/A 5.098±0.00 1.468±0.00 7.754±6.66 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025047 ENSMUST00000072141 4.998±3.16 4.015±0.95 5.394±0.53 5.201±0.86 3.207±1.29 3.006±0.91 2.269±0.53 3.405±1.34 4.660±2.25 5.224±0.39 2.088±0.42 7.055±2.54 9.035±3.62 3.471±0.72
ENSMUSG00000033033 ENSMUST00000035822 6.454±2.71 5.870±0.45 7.695±0.69 N/A 10.009±3.41 6.009±0.64 2.386±0.39 2.309±0.09 1.530±0.00 11.616±2.60 N/A 6.826±0.40 2.154±0.00 1.638±0.28
ENSMUST00000140512 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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