C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: THUMP domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378727 THUMPD2-002 ENSG00000138050 9606 - 2:39736307-39779267 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000378727
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000378727 0.732±0.00 0.972±0.00 0.282±0.00 0.413±0.00 1.088±0.00 0.609±0.00 1.020±0.00 0.462±0.00 0.380±0.00 0.583±0.00 2.016±0.89 0.637±0.20 0.680±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066V CIL_00066V_0001 CGP 2:39664982-39779267
CIL_00066Z CIL_00066Z_0001 CGP 2:39736060-40611053

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0008168 IEA methyltransferase activity
GO:0032259 IEA methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025093 Thumpd2-201 protein_coding Mus_musculus 0 431

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