C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00067R_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000143891-ENSG00000115875 CGP 9606 2:38665910-38751494
GeneTranscriptPositionBiotype
ENSG00000115875 (SRSF7)
serine/arginine-rich splicing factor 7 		ENST00000313117 (SRSF7-001) 38743599-38751494 protein_coding
ENST00000409276 (SRSF7-012) 38744893-38751358 protein_coding
ENST00000415527 (SRSF7-004) 38748047-38751138 nonsense_mediated_decay
ENST00000425778 (SRSF7-002) 38743601-38751415 nonsense_mediated_decay
ENST00000425941 (SRSF7-010) 38744453-38751363 nonsense_mediated_decay
ENST00000431066 (SRSF7-011) 38744895-38751282 nonsense_mediated_decay
ENST00000432873 (SRSF7-008) 38744893-38748616 nonsense_mediated_decay
ENST00000443213 (SRSF7-003) 38744918-38751352 nonsense_mediated_decay
ENST00000446327 (SRSF7-201) 38743599-38751494 protein_coding
ENST00000452806 (SRSF7-007) 38744717-38749564 protein_coding
ENST00000477635 (SRSF7-005) 38744895-38747044 retained_intron
ENST00000487773 (SRSF7-009) 38745053-38748912 retained_intron
ENSG00000143891 (GALM)
galactose mutarotase (aldose 1-epimerase) 		ENST00000272252 (GALM-001) 38665910-38734768 protein_coding
ENST00000410063 (GALM-003) 38666117-38733958 protein_coding
ENST00000427858 (GALM-004) 38666081-38681348 nonsense_mediated_decay
ENST00000434934 (GALM-005) 38681295-38741237 protein_coding
ENST00000444351 (GALM-002) 38666243-38731802 nonsense_mediated_decay
ENSG00000232518 (AC074366.3)
 ENST00000446277 (AC074366.3-001) 38668688-38671421 antisense
CIL_00067R_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035473-ENSMUSG00000024097 CGP 10090 17:80127471-80207305
GeneTranscriptPositionBiotype
ENSMUSG00000024097 (Srsf7)
serine/arginine-rich splicing factor 7 		ENSMUST00000063417 (Srsf7-201) 80200089-80207305 protein_coding
ENSMUSG00000035473 (Galm)
galactose mutarotase 		ENSMUST00000039205 (Galm-001) 80127471-80185101 protein_coding
ENSMUST00000133955 (Galm-002) 80145152-80183528 protein_coding
ENSMUSG00000088453 (Gm25706)
predicted gene, 25706 		ENSMUST00000157828 (Gm25706-201) 80196158-80196404 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00067R_0001ENSG00000115875ENST00000313117ENST00000409276ENST00000415527ENST00000425778ENST00000425941ENST00000431066ENST00000432873ENST00000443213ENST00000446327ENST00000452806ENST00000477635ENST00000487773ENSG00000143891ENST00000272252ENST00000410063ENST00000427858ENST00000434934ENST00000444351ENSG00000232518ENST00000446277CIL_00067R_0002ENSMUSG00000024097ENSMUST00000063417ENSMUSG00000035473ENSMUST00000039205ENSMUST00000133955ENSMUSG00000088453ENSMUST00000157828
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00067R_0001ENSG00000115875ENST00000313117ENST00000409276ENST00000425778ENST00000425941ENST00000443213ENST00000446327ENSG00000143891ENST00000272252ENST00000410063ENST00000427858ENST00000434934ENST00000444351ENSG00000232518ENST00000446277CIL_00067R_0002ENSMUSG00000024097ENSMUST00000063417ENSMUSG00000035473ENSMUST00000039205ENSMUST00000133955ENSMUSG00000088453ENSMUST00000157828
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115875 ENST00000313117 N/A N/A 2.004±0.00 6.705±1.70 3.915±0.00 4.847±1.55 2.128±0.00 3.222±0.10 2.761±0.00 2.732±0.00 N/A 9.814±4.77 9.973±2.89 N/A
ENST00000409276 26.871±0.00 35.241±0.00 5.417±0.00 11.012±4.29 19.647±0.16 26.552±6.79 6.299±2.81 14.181±10.50 18.376±4.83 38.878±0.00 11.176±4.94 64.432±47.34 34.462±9.51 65.851±20.78
ENST00000415527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000425778 4.278±0.00 9.402±0.00 N/A 3.129±0.00 4.546±1.23 4.399±0.00 1.395±0.67 6.180±0.00 2.409±0.00 5.833±1.15 3.035±0.00 14.443±5.13 4.050±0.09 12.174±0.00
ENST00000425941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.059±0.00 N/A N/A N/A
ENST00000431066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443213 N/A 9.804±0.00 5.285±0.00 5.056±0.00 3.674±0.03 10.287±0.00 2.109±0.00 5.571±0.31 3.346±0.26 6.031±0.00 0.723±0.00 9.292±3.38 N/A N/A
ENST00000446327 N/A N/A N/A 2.037±0.00 N/A N/A N/A N/A 2.905±0.00 N/A N/A 8.474±0.00 N/A 13.818±0.00
ENST00000452806 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000143891 ENST00000272252 3.430±0.00 3.053±0.00 8.475±0.00 0.993±0.57 3.246±1.79 5.457±0.41 2.914±0.00 9.404±6.03 6.024±4.70 3.535±2.05 0.938±0.46 8.057±2.46 4.311±1.78 4.995±4.04
ENST00000410063 N/A N/A N/A N/A N/A N/A 2.119±0.00 N/A 3.852±0.00 N/A 0.506±0.04 5.382±0.00 N/A N/A
ENST00000427858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.693±0.00 N/A N/A N/A
ENST00000434934 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.326±0.00 N/A N/A N/A N/A
ENST00000444351 N/A N/A N/A N/A N/A N/A 0.686±0.00 N/A N/A N/A 1.143±0.00 N/A N/A N/A
ENSG00000232518 ENST00000446277 0.086±0.00 0.713±0.00 0.866±0.00 0.609±0.00 0.120±0.00 0.166±0.00 0.081±0.00 0.242±0.00 N/A 0.265±0.00 0.179±0.00 0.102±0.00 N/A 0.104±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024097 ENSMUST00000063417 6.063±2.48 5.658±3.30 15.917±0.00 57.482±37.44 4.461±1.07 5.784±1.73 4.068±1.74 4.753±1.38 14.081±13.30 4.180±1.10 2.661±0.64 10.828±6.01 18.018±9.86 17.601±6.85
ENSMUSG00000035473 ENSMUST00000039205 20.484±1.33 5.194±0.66 4.788±0.93 0.493±0.22 13.112±3.15 16.551±0.95 7.629±1.13 62.160±2.22 40.175±22.52 2.995±0.49 0.779±0.33 20.080±5.78 14.646±15.50 10.009±4.41
ENSMUST00000133955 N/A N/A N/A 0.492±0.00 N/A N/A N/A N/A N/A N/A 1.078±0.00 4.004±0.00 N/A 9.554±0.00
ENSMUSG00000088453 ENSMUST00000157828 N/A N/A 0.123±0.00 0.816±0.44 N/A N/A N/A 0.412±0.00 0.267±0.19 N/A N/A 1.893±1.42 0.102±0.04 0.626±0.13

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