C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serine/arginine-rich splicing factor 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000425778 SRSF7-002 ENSG00000115875 9606 - 2:38743601-38751415 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000425778
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000425778 4.278±0.00 9.402±0.00 3.129±0.00 4.546±1.23 4.399±0.00 1.395±0.67 6.180±0.00 2.409±0.00 5.833±1.15 3.035±0.00 14.443±5.13 4.050±0.09 12.174±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00067R CIL_00067R_0001 CGP 2:38665910-38751494

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000063417 Srsf7-201 protein_coding Mus_musculus 0 891
ENSMUST00000184135 Gm18821-001 processed_pseudogene Mus_musculus 0 442

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