C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serine/arginine-rich splicing factor 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409276 SRSF7-012 ENSG00000115875 9606 - 2:38744893-38751358 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000409276
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000409276 26.871±0.00 35.241±0.00 5.417±0.00 11.012±4.29 19.647±0.16 26.552±6.79 6.299±2.81 14.181±10.50 18.376±4.83 38.878±0.00 11.176±4.94 64.432±47.34 34.462±9.51 65.851±20.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00067R CIL_00067R_0001 CGP 2:38665910-38751494

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0005634 IDA nucleus
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000063417 Srsf7-201 protein_coding Mus_musculus 0 1323
ENSMUST00000184135 Gm18821-001 processed_pseudogene Mus_musculus 0 750

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