C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat containing 8 family, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112707 Lrrc8b-201 ENSMUSG00000070639 10090 + 5:105415775-105486189 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000112707
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000112707 3.530±0.76 35.655±7.16 0.893±0.00 4.437±1.69 4.377±2.71 5.339±1.10 1.219±0.44 7.773±2.65 0.720±0.85 12.822±2.16 0.235±0.05 9.750±0.80 3.392±0.13 234.747±104.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069D CIL_00069D_0002 CGP 5:105215699-105486189
CIL_00069C CIL_00069C_0002 CGP 5:105415775-105613018

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005886 IEA plasma membrane
GO:0006811 IEA ion transport
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330947 LRRC8B-001 protein_coding Homo_sapiens 0 2483
ENST00000358200 LRRC8B-201 protein_coding Homo_sapiens 0 1986
ENST00000439853 LRRC8B-202 protein_coding Homo_sapiens 0 2483
ENST00000449440 LRRC8B-003 protein_coding Homo_sapiens 0 479
ENST00000455305 RP1-131F15.2-001 processed_pseudogene Homo_sapiens 0 1123

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