C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat containing 8 family, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000439853 LRRC8B-202 ENSG00000197147 9606 + 1:89568241-89597859 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000439853
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000439853 1.630±0.00 0.976±0.00 0.505±0.00 4.833±0.00 1.658±0.00 1.078±0.03 0.504±0.08 0.110±0.00 0.708±0.06 1.045±0.00 0.666±0.51 0.796±0.72 0.336±0.14 1.344±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069D CIL_00069D_0001 CGP 1:89364058-89597864
CIL_00069C CIL_00069C_0001 CGP 1:89524836-89769903

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005886 IEA plasma membrane
GO:0006811 IEA ion transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112707 Lrrc8b-201 protein_coding Mus_musculus 0 2483
ENSMUST00000159255 Mettl13-002 retained_intron Mus_musculus 0.0001 55

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