C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006AH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000006029-ENSDARG00000018688 CGP 7955 4:6723923-6783981
GeneTranscriptPositionBiotype
ENSDARG00000006029 (lta4h)
leukotriene A4 hydrolase 		ENSDART00000028171 (lta4h-001) 6723923-6743481 protein_coding
ENSDART00000148973 (lta4h-002) 6737031-6743439 retained_intron
ENSDARG00000018688 (elk3)
ELK3, ETS-domain protein 		ENSDART00000009909 (elk3-201) 6769178-6783407 protein_coding
ENSDART00000149218 (elk3-001) 6747634-6783981 protein_coding
CIL_0006AH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000111144-ENSG00000111145 CGP 9606 12:96000828-96269835
GeneTranscriptPositionBiotype
ENSG00000111144 (LTA4H)
leukotriene A4 hydrolase 		ENST00000228740 (LTA4H-001) 96000828-96035661 protein_coding
ENST00000413268 (LTA4H-002) 96000907-96043520 protein_coding
ENST00000537111 (LTA4H-009) 96000830-96011258 retained_intron
ENST00000547393 (LTA4H-011) 96003594-96013252 retained_intron
ENST00000547982 (LTA4H-008) 96011295-96015174 retained_intron
ENST00000548375 (LTA4H-010) 96006314-96015134 processed_transcript
ENST00000548852 (LTA4H-004) 96002990-96035641 nonsense_mediated_decay
ENST00000552091 (LTA4H-012) 96013239-96014324 retained_intron
ENST00000552789 (LTA4H-003) 96000830-96043477 protein_coding
ENST00000553041 (LTA4H-007) 96000833-96035528 retained_intron
ENSG00000111145 (ELK3)
ELK3, ETS-domain protein (SRF accessory protein 2) 		ENST00000228741 (ELK3-001) 96194382-96269835 protein_coding
ENST00000547249 (ELK3-003) 96194402-96223682 protein_coding
ENST00000547860 (ELK3-004) 96194614-96247211 protein_coding
ENST00000549529 (ELK3-006) 96255460-96267490 processed_transcript
ENST00000549985 (ELK3-005) 96247131-96267357 nonsense_mediated_decay
ENST00000552142 (ELK3-002) 96194545-96267830 protein_coding
ENSG00000258177 (RP11-394J1.2)
 ENST00000551844 (RP11-394J1.2-001) 96222797-96223973 antisense
ENSG00000277062 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000480166 (Metazoa_SRP.1-409) 96101951-96102249 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006AH_0001ENSDARG00000006029ENSDART00000028171ENSDART00000148973ENSDARG00000018688ENSDART00000009909ENSDART00000149218CIL_0006AH_0002ENSG00000111144ENST00000228740ENST00000413268ENST00000537111ENST00000547393ENST00000547982ENST00000548375ENST00000548852ENST00000552091ENST00000552789ENST00000553041ENSG00000111145ENST00000228741ENST00000547249ENST00000547860ENST00000549529ENST00000549985ENST00000552142ENSG00000258177ENST00000551844ENSG00000277062ENST00000480166
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006AH_0001ENSDARG00000006029ENSDART00000028171ENSDARG00000018688ENSDART00000009909ENSDART00000149218CIL_0006AH_0002ENSG00000111144ENST00000228740ENST00000413268ENST00000537111ENST00000547982ENST00000548852ENST00000553041ENSG00000111145ENST00000228741ENSG00000258177ENST00000551844ENSG00000277062ENST00000480166
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006029 ENSDART00000028171 N/A N/A N/A 5.496±4.08 N/A N/A 6.631±4.52 50.356±26.10 1.140±0.00 N/A 11.028±0.00 N/A N/A N/A
ENSDART00000148973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000018688 ENSDART00000009909 N/A N/A N/A 1.609±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000149218 N/A N/A N/A 1.779±0.37 N/A N/A 3.266±0.40 2.012±0.00 0.282±0.00 N/A 1.936±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000111144 ENST00000228740 8.431±0.00 16.539±0.00 5.893±0.00 4.586±1.31 14.979±11.27 20.327±11.41 4.407±2.84 5.815±0.03 5.206±0.14 34.281±20.74 8.113±3.18 29.344±18.85 15.547±3.11 23.479±0.00
ENST00000413268 N/A N/A 2.626±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 8.593±0.00 N/A N/A
ENST00000537111 N/A N/A 2.308±0.00 N/A N/A N/A N/A N/A 2.018±0.00 N/A N/A N/A N/A N/A
ENST00000547393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547982 N/A N/A N/A N/A N/A N/A N/A N/A 3.594±0.00 N/A N/A N/A N/A N/A
ENST00000548375 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548852 N/A N/A N/A 3.801±0.00 6.836±0.00 6.525±0.00 1.936±0.00 5.763±0.00 3.580±0.00 35.547±0.00 N/A 24.107±7.95 N/A N/A
ENST00000552091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552789 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553041 N/A 0.831±0.00 0.552±0.00 N/A 0.914±0.00 1.060±0.00 N/A N/A 0.697±0.00 3.631±0.00 N/A N/A N/A 2.586±0.00
ENSG00000111145 ENST00000228741 16.999±0.00 22.156±0.00 N/A 1.068±0.54 7.995±4.49 4.459±3.89 3.634±2.66 2.474±0.72 3.017±0.87 10.224±5.80 2.043±0.00 4.764±1.80 6.917±1.57 6.009±2.60
ENST00000547249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547860 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549985 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258177 ENST00000551844 N/A N/A 5.860±0.00 3.037±0.00 N/A N/A N/A N/A N/A N/A N/A 23.520±0.00 29.976±0.00 25.441±0.00
ENSG00000277062 ENST00000480166 0.113±0.00 0.176±0.00 N/A N/A 0.303±0.00 N/A 0.057±0.00 N/A N/A N/A N/A N/A N/A N/A

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