C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006CY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166869-ENSG00000166501 CGP 9606 16:23754627-24220611
GeneTranscriptPositionBiotype
ENSG00000166501 (PRKCB)
protein kinase C, beta 		ENST00000303531 (PRKCB-002) 23836024-24220611 protein_coding
ENST00000321728 (PRKCB-001) 23836001-24220611 protein_coding
ENST00000463752 (PRKCB-008) 24172176-24174930 retained_intron
ENST00000466124 (PRKCB-010) 24185531-24191588 protein_coding
ENST00000472066 (PRKCB-007) 24151685-24180845 protein_coding
ENST00000482000 (PRKCB-006) 24092790-24111321 processed_transcript
ENST00000486868 (PRKCB-005) 24031980-24092860 retained_intron
ENST00000487674 (PRKCB-009) 24174216-24185567 retained_intron
ENST00000498058 (PRKCB-003) 23836082-23869326 protein_coding
ENST00000498739 (PRKCB-004) 23837223-24113065 protein_coding
ENSG00000166869 (CHP2)
calcineurin-like EF-hand protein 2 		ENST00000300113 (CHP2-001) 23754627-23758951 protein_coding
ENSG00000279202 (CTA-113A6.1)
 ENST00000624179 (CTA-113A6.1-001) 24098239-24099971 TEC
ENSG00000279276 (CTA-345G4.1)
 ENST00000622948 (CTA-345G4.1-001) 23962951-23963351 TEC
ENSG00000279554 (CTA-113A6.2)
 ENST00000624082 (CTA-113A6.2-001) 24208105-24208478 TEC
ENSG00000279756 (CTD-2385L22.2)
 ENST00000623305 (CTD-2385L22.2-001) 23753689-23755939 TEC
CIL_0006CY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030865-ENSMUSG00000052889 CGP 10090 7:122219496-122634402
GeneTranscriptPositionBiotype
ENSMUSG00000030865 (Chp2)
calcineurin-like EF hand protein 2 		ENSMUST00000033152 (Chp2-001) 122219496-122222824 protein_coding
ENSMUST00000160828 (Chp2-002) 122221573-122222183 processed_transcript
ENSMUSG00000052889 (Prkcb)
protein kinase C, beta 		ENSMUST00000064921 (Prkcb-003) 122289309-122634402 protein_coding
ENSMUST00000064989 (Prkcb-001) 122289297-122628655 protein_coding
ENSMUST00000127910 (Prkcb-006) 122599982-122628078 processed_transcript
ENSMUST00000131167 (Prkcb-004) 122290028-122425041 processed_transcript
ENSMUST00000143692 (Prkcb-002) 122288751-122634399 nonsense_mediated_decay
ENSMUST00000149583 (Prkcb-005) 122416068-122457326 processed_transcript
ENSMUSG00000082803 (Gm14423)
predicted gene 14423 		ENSMUST00000121335 (Gm14423-001) 122550435-122550555 processed_pseudogene
ENSMUSG00000083132 (Gm14422)
predicted gene 14422 		ENSMUST00000120986 (Gm14422-001) 122612228-122612378 processed_pseudogene
ENSMUSG00000084230 (Gm14388)
predicted gene 14388 		ENSMUST00000118119 (Gm14388-001) 122442023-122442499 processed_pseudogene
ENSMUSG00000087520 (Gm14389)
predicted gene 14389 		ENSMUST00000140453 (Gm14389-001) 122484195-122484420 processed_pseudogene
ENSMUSG00000088299 (Gm26414)
predicted gene, 26414 		ENSMUST00000157674 (Gm26414-201) 122446858-122447126 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006CY_0001ENSG00000166501ENST00000303531ENST00000321728ENST00000463752ENST00000466124ENST00000472066ENST00000482000ENST00000486868ENST00000487674ENST00000498058ENST00000498739ENSG00000166869ENST00000300113ENSG00000279202ENST00000624179ENSG00000279276ENST00000622948ENSG00000279554ENST00000624082ENSG00000279756ENST00000623305CIL_0006CY_0002ENSMUSG00000030865ENSMUST00000033152ENSMUST00000160828ENSMUSG00000052889ENSMUST00000064921ENSMUST00000064989ENSMUST00000127910ENSMUST00000131167ENSMUST00000143692ENSMUST00000149583ENSMUSG00000082803ENSMUST00000121335ENSMUSG00000083132ENSMUST00000120986ENSMUSG00000084230ENSMUST00000118119ENSMUSG00000087520ENSMUST00000140453ENSMUSG00000088299ENSMUST00000157674
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006CY_0001ENSG00000166501ENST00000303531ENST00000321728ENST00000482000ENST00000498739ENSG00000166869ENST00000300113ENSG00000279202ENST00000624179ENSG00000279276ENST00000622948ENSG00000279554ENST00000624082ENSG00000279756ENST00000623305CIL_0006CY_0002ENSMUSG00000030865ENSMUST00000033152ENSMUSG00000052889ENSMUST00000064921ENSMUST00000064989ENSMUST00000127910ENSMUST00000143692ENSMUSG00000082803ENSMUST00000121335ENSMUSG00000083132ENSMUST00000120986ENSMUSG00000084230ENSMUST00000118119ENSMUSG00000087520ENSMUST00000140453ENSMUSG00000088299ENSMUST00000157674
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000166501 ENST00000303531 0.845±0.00 9.928±0.00 N/A 26.895±0.01 0.885±0.59 3.255±0.00 0.120±0.00 0.439±0.00 1.518±1.04 2.661±0.47 N/A 0.431±0.12 0.703±0.04 1.833±0.79
ENST00000321728 0.525±0.00 N/A N/A 20.012±1.15 N/A N/A 0.376±0.00 N/A 0.328±0.00 2.977±0.53 0.083±0.01 0.372±0.03 0.742±0.13 2.985±0.00
ENST00000463752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482000 N/A N/A N/A N/A N/A N/A N/A 2.056±0.00 N/A N/A N/A N/A N/A N/A
ENST00000486868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498058 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.782±0.00 N/A
ENSG00000166869 ENST00000300113 0.156±0.00 0.416±0.00 0.529±0.00 0.441±0.05 0.552±0.24 14.051±7.49 0.054±0.02 0.352±0.00 0.501±0.45 0.286±0.13 0.111±0.02 0.075±0.00 0.508±0.09 3.707±1.74
ENSG00000279202 ENST00000624179 0.045±0.00 0.394±0.00 N/A 0.165±0.00 0.160±0.06 0.103±0.03 0.082±0.07 0.057±0.00 0.022±0.00 0.143±0.13 0.017±0.00 0.034±0.00 N/A 0.028±0.01
ENSG00000279276 ENST00000622948 N/A 0.541±0.00 N/A 0.035±0.00 1.054±0.00 N/A 0.031±0.00 N/A N/A 0.359±0.00 N/A N/A N/A 0.062±0.00
ENSG00000279554 ENST00000624082 N/A 0.334±0.00 N/A 0.545±0.45 N/A N/A N/A N/A 0.459±0.00 0.115±0.00 N/A 0.102±0.00 N/A 0.052±0.00
ENSG00000279756 ENST00000623305 0.101±0.00 0.104±0.00 N/A 0.136±0.00 N/A N/A N/A N/A 0.067±0.00 0.119±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030865 ENSMUST00000033152 8.777±2.19 1.638±0.59 3.047±0.52 0.451±0.08 6.870±2.29 50.300±20.41 1.186±0.20 0.719±0.14 1.650±0.71 1.736±0.28 1.303±0.54 6.538±2.22 0.246±0.19 6.010±0.81
ENSMUST00000160828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000052889 ENSMUST00000064921 N/A 1.204±0.50 24.328±4.82 8.181±1.29 4.686±0.00 N/A 0.347±0.14 0.455±0.13 0.665±0.68 1.077±0.00 0.183±0.25 1.239±0.69 0.256±0.19 0.407±0.26
ENSMUST00000064989 2.172±0.99 1.205±0.30 N/A 70.304±0.00 9.569±3.30 0.860±0.37 0.531±0.17 0.704±0.24 0.322±0.22 2.621±0.39 0.023±0.01 1.425±0.23 0.189±0.25 1.000±0.14
ENSMUST00000127910 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.111±0.03 N/A
ENSMUST00000131167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143692 0.840±0.00 0.773±0.35 N/A N/A 5.446±0.52 1.253±0.38 0.121±0.00 0.118±0.07 0.159±0.07 0.552±0.11 N/A 1.846±0.26 0.086±0.00 0.175±0.03
ENSMUST00000149583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000082803 ENSMUST00000121335 1667.920±0.00 1169.400±46.43 N/A 41.550±33.50 1330.850±85.32 1589.610±0.00 N/A N/A 932.992±923.16 N/A N/A N/A 14.309±0.00 1499.771±1380.34
ENSMUSG00000083132 ENSMUST00000120986 674.375±21.30 197.318±0.00 5.086±0.00 4.598±0.05 455.372±0.00 N/A 288.328±0.00 311.025±121.07 76.454±74.12 N/A N/A 14.788±0.00 N/A 309.269±59.78
ENSMUSG00000084230 ENSMUST00000118119 0.221±0.10 N/A N/A 0.034±0.00 N/A 0.347±0.11 N/A 0.119±0.01 0.132±0.10 N/A N/A 1.134±0.00 0.153±0.00 0.160±0.05
ENSMUSG00000087520 ENSMUST00000140453 N/A N/A N/A N/A 1.315±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000088299 ENSMUST00000157674 N/A N/A N/A 0.602±0.00 0.755±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

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