C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006HP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000041429-ENSDARG00000041431 CGP 7955 18:18775958-18822315
GeneTranscriptPositionBiotype
ENSDARG00000016038 (ptplad1)
protein tyrosine phosphatase-like A domain containing 1 		ENSDART00000006300 (ptplad1-001) 18762788-18775994 protein_coding
ENSDARG00000041429 (vwa9)
von Willebrand factor A domain containing 9 		ENSDART00000060731 (vwa9-201) 18775959-18786588 protein_coding
ENSDART00000129776 (vwa9-001) 18775958-18786630 protein_coding
ENSDART00000135800 (vwa9-002) 18775958-18784958 protein_coding
ENSDART00000138593 (vwa9-003) 18775958-18779966 processed_transcript
ENSDARG00000041431 (slc24a1)
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 		ENSDART00000060735 (slc24a1-201) 18789421-18822315 protein_coding
ENSDART00000135729 (slc24a1-001) 18786774-18820671 protein_coding
ENSDARG00000096256 (si:ch211-117i10.10)
si:ch211-117i10.10 		ENSDART00000151085 (si:ch211-117i10.10-001) 18806700-18813924 sense_intronic
CIL_0006HP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000138614-ENSG00000074621 CGP 9606 15:65578753-65660995
GeneTranscriptPositionBiotype
ENSG00000074621 (SLC24A1)
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 		ENST00000261892 (SLC24A1-001) 65621932-65656260 protein_coding
ENST00000339868 (SLC24A1-201) 65621932-65656260 protein_coding
ENST00000399033 (SLC24A1-004) 65623999-65654110 protein_coding
ENST00000425561 (SLC24A1-008) 65611378-65625857 processed_transcript
ENST00000434116 (SLC24A1-003) 65611366-65652929 retained_intron
ENST00000449142 (SLC24A1-006) 65642905-65654191 processed_transcript
ENST00000505666 (SLC24A1-011) 65652739-65655513 protein_coding
ENST00000535950 (SLC24A1-009) 65611812-65624018 processed_transcript
ENST00000537259 (SLC24A1-002) 65611405-65660995 protein_coding
ENST00000539516 (SLC24A1-010) 65643928-65650608 retained_intron
ENST00000544319 (SLC24A1-007) 65622009-65654080 protein_coding
ENST00000546330 (SLC24A1-005) 65624081-65654079 protein_coding
ENSG00000138614 (VWA9)
von Willebrand factor A domain containing 9 		ENST00000313182 (VWA9-008) 65578782-65611245 protein_coding
ENST00000420799 (VWA9-004) 65579147-65611242 protein_coding
ENST00000431261 (VWA9-006) 65579065-65611258 protein_coding
ENST00000442903 (VWA9-003) 65579248-65611289 protein_coding
ENST00000561769 (VWA9-009) 65599810-65611131 protein_coding
ENST00000562830 (VWA9-010) 65605183-65611123 protein_coding
ENST00000563729 (VWA9-012) 65595765-65598865 retained_intron
ENST00000564306 (VWA9-005) 65599377-65611154 retained_intron
ENST00000567744 (VWA9-002) 65579027-65611121 protein_coding
ENST00000567923 (VWA9-016) 65599847-65611223 protein_coding
ENST00000567940 (VWA9-017) 65599897-65611148 nonsense_mediated_decay
ENST00000568573 (VWA9-015) 65599883-65611121 protein_coding
ENST00000569004 (VWA9-011) 65595733-65607409 nonsense_mediated_decay
ENST00000569180 (VWA9-013) 65584829-65586958 processed_transcript
ENST00000569491 (VWA9-007) 65579097-65611131 protein_coding
ENST00000569565 (VWA9-014) 65605203-65611139 nonsense_mediated_decay
ENST00000573314 (VWA9-001) 65578753-65611136 nonsense_mediated_decay
ENSG00000174485 (DENND4A)
DENN/MADD domain containing 4A 		ENST00000431932 (DENND4A-003) 65661777-65792124 protein_coding
ENST00000443035 (DENND4A-001) 65659123-65792124 protein_coding
ENST00000561863 (DENND4A-009) 65658046-65661929 protein_coding
ENST00000562028 (DENND4A-006) 65696316-65701801 retained_intron
ENST00000562540 (DENND4A-008) 65661821-65664956 retained_intron
ENST00000564674 (DENND4A-005) 65691458-65792293 protein_coding
ENST00000567323 (DENND4A-007) 65680635-65690538 processed_transcript
ENST00000568515 (DENND4A-004) 65715075-65792207 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006HP_0001ENSDARG00000016038ENSDART00000006300ENSDARG00000041429ENSDART00000060731ENSDART00000129776ENSDART00000135800ENSDART00000138593ENSDARG00000041431ENSDART00000060735ENSDART00000135729ENSDARG00000096256ENSDART00000151085CIL_0006HP_0002ENSG00000074621ENST00000261892ENST00000339868ENST00000399033ENST00000425561ENST00000434116ENST00000449142ENST00000505666ENST00000535950ENST00000537259ENST00000539516ENST00000544319ENST00000546330ENSG00000138614ENST00000313182ENST00000420799ENST00000431261ENST00000442903ENST00000561769ENST00000562830ENST00000563729ENST00000564306ENST00000567744ENST00000567923ENST00000567940ENST00000568573ENST00000569004ENST00000569180ENST00000569491ENST00000569565ENST00000573314ENSG00000174485ENST00000431932ENST00000443035ENST00000561863ENST00000562028ENST00000562540ENST00000564674ENST00000567323ENST00000568515
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006HP_0001ENSDARG00000016038ENSDART00000006300ENSDARG00000041429ENSDART00000060731ENSDART00000135800ENSDART00000138593ENSDARG00000041431ENSDART00000060735ENSDART00000135729ENSDARG00000096256ENSDART00000151085CIL_0006HP_0002ENSG00000074621ENST00000261892ENST00000339868ENST00000434116ENSG00000138614ENST00000313182ENST00000420799ENST00000431261ENST00000442903ENST00000564306ENST00000567744ENST00000569004ENST00000569491ENST00000573314ENSG00000174485ENST00000431932ENST00000443035ENST00000564674ENST00000568515
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000016038 ENSDART00000006300 N/A N/A N/A 7.021±2.75 N/A N/A 5.914±2.07 9.217±3.59 0.487±0.00 N/A 0.581±0.00 N/A N/A N/A
ENSDARG00000041429 ENSDART00000060731 N/A N/A N/A 6.806±1.13 N/A N/A 4.700±1.08 6.631±0.00 0.407±0.00 N/A 1.416±0.00 N/A N/A N/A
ENSDART00000129776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000135800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.495±0.00 N/A N/A N/A
ENSDART00000138593 N/A N/A N/A N/A N/A N/A 28.500±0.00 60.571±36.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000041431 ENSDART00000060735 N/A N/A N/A 0.915±0.01 N/A N/A 0.207±0.09 0.107±0.00 0.034±0.00 N/A 0.216±0.00 N/A N/A N/A
ENSDART00000135729 N/A N/A N/A 0.194±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000096256 ENSDART00000151085 N/A N/A N/A 4.093±2.63 N/A N/A 2.048±1.31 4.518±1.94 N/A N/A 0.267±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000074621 ENST00000261892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.406±0.03 1.454±0.00 2.331±0.00
ENST00000339868 N/A N/A 0.755±0.00 N/A 1.051±0.00 N/A N/A N/A N/A N/A N/A N/A 0.833±0.00 N/A
ENST00000399033 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000425561 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434116 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.984±0.00
ENST00000449142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537259 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546330 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000138614 ENST00000313182 1.840±0.00 4.745±0.00 N/A 1.275±0.00 4.519±0.00 2.895±0.88 2.721±0.00 4.936±1.30 6.054±0.00 2.957±0.00 2.355±0.00 6.560±2.80 9.653±0.74 5.317±1.50
ENST00000420799 N/A N/A 2.087±0.00 2.420±0.10 0.998±0.00 2.296±0.00 N/A N/A 2.738±0.00 N/A 1.061±0.00 4.117±2.29 N/A 2.127±0.00
ENST00000431261 3.023±0.00 4.063±0.00 N/A N/A 2.395±0.00 N/A 0.681±0.00 3.662±0.00 N/A 1.928±1.02 N/A N/A N/A 4.635±0.00
ENST00000442903 N/A N/A 1.418±0.00 N/A N/A N/A N/A N/A N/A 1.106±0.00 0.310±0.00 N/A N/A N/A
ENST00000561769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563729 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564306 N/A N/A N/A N/A N/A 2.328±0.00 1.714±0.00 N/A 5.490±0.00 2.804±0.00 3.215±0.00 N/A N/A N/A
ENST00000567744 N/A N/A 1.469±0.00 N/A 0.641±0.00 N/A 1.184±0.00 N/A N/A N/A N/A 3.327±0.00 N/A N/A
ENST00000567923 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568573 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569004 N/A N/A N/A N/A 2.643±0.00 N/A N/A 2.346±0.00 N/A N/A N/A N/A N/A N/A
ENST00000569180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569491 N/A N/A N/A N/A 1.172±0.00 N/A N/A N/A N/A N/A N/A 1.605±0.00 N/A N/A
ENST00000569565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573314 1.369±0.00 N/A N/A 1.387±0.00 N/A 0.984±0.00 N/A 1.695±0.10 1.753±0.00 0.503±0.00 N/A 3.205±1.22 3.649±0.00 2.739±0.00
ENSG00000174485 ENST00000431932 1.962±0.00 1.635±0.00 1.399±0.00 3.330±1.56 1.251±0.00 2.769±0.00 0.893±0.23 1.451±0.14 2.060±0.71 5.317±3.13 0.693±0.00 1.947±0.99 0.861±0.14 1.889±0.07
ENST00000443035 1.649±0.00 1.582±0.00 0.895±0.00 1.901±0.31 0.984±0.00 1.685±0.00 0.466±0.12 1.563±0.37 1.459±0.16 2.887±0.48 1.391±0.88 1.265±0.47 N/A 2.389±1.06
ENST00000561863 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562028 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564674 N/A N/A 1.779±0.00 N/A N/A 2.353±0.00 N/A 1.769±0.00 N/A N/A N/A N/A N/A N/A
ENST00000567323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568515 N/A N/A N/A 7.339±0.00 N/A N/A 1.590±0.00 N/A 3.888±0.00 N/A N/A N/A N/A N/A

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