C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000546330 SLC24A1-005 ENSG00000074621 9606 + 15:65624081-65654079 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006HP CIL_0006HP_0002 CGP 15:65578753-65660995
CIL_0004VF CIL_0004VF_0002 CGP 15:65611366-65792293

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006810 TAS transport
GO:0006811 TAS ion transport
GO:0006816 NAS:IEA calcium ion transport
GO:0007601 NAS:IEA visual perception
GO:0007603 TAS phototransduction, visible light
GO:0008273 NAS:IEA calcium, potassium:sodium antiporter activity
GO:0009642 NAS response to light intensity
GO:0015293 IEA symporter activity
GO:0016020 TAS membrane
GO:0016021 IEA integral component of membrane
GO:0016056 TAS rhodopsin mediated signaling pathway
GO:0019867 NAS outer membrane
GO:0035725 IEA sodium ion transmembrane transport
GO:0055085 TAS:IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037798 Slc24a1-201 protein_coding Mus_musculus 0 863

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