C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DENN/MADD domain containing 4A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000443035 DENND4A-001 ENSG00000174485 9606 - 15:65659123-65792124 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000443035
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000443035 1.649±0.00 1.582±0.00 0.895±0.00 1.901±0.31 0.984±0.00 1.685±0.00 0.466±0.12 1.563±0.37 1.459±0.16 2.887±0.48 1.391±0.88 1.265±0.47 2.389±1.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006HP CIL_0006HP_0002 CGP 15:65578753-65660995
CIL_0004VF CIL_0004VF_0002 CGP 15:65611366-65792293

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 NAS DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 NAS regulation of transcription, DNA-templated
GO:0017112 IDA Rab guanyl-nucleotide exchange factor activity
GO:0032851 IDA positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038890 Dennd4a-201 protein_coding Mus_musculus 0 3620
ENSMUST00000146436 Accs-004 retained_intron Mus_musculus 0.00001 58
ENSMUST00000108492 Hif3a-002 protein_coding Mus_musculus 0.00004 57

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