C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase, transferase B, alpha 1-3-galactosyltransferase)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114045 Abo-002 ENSMUSG00000015787 10090 - 2:26842503-26856798 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaTestisENSMUST00000114045
Transcript ID Placenta Testis
ENSMUST00000114045 0.028±0.00 0.470±0.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006IU CIL_0006IU_0002 CGP 2:26667674-26864979
CIL_0006IX CIL_0006IX_0002 CGP 2:26842503-26902879

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004380 IDA glycoprotein-fucosylgalactoside alpha-N-acetylgalactosaminyltransferase activity
GO:0004381 IDA fucosylgalactoside 3-alpha-galactosyltransferase activity
GO:0005975 IEA carbohydrate metabolic process
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000453660 ABO-001 processed_transcript Homo_sapiens 0 529
ENST00000538324 ABO-201 protein_coding Homo_sapiens 0 527
ENST00000611156 ABO-202 protein_coding Homo_sapiens 0 527

Loading