C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase, transferase B, alpha 1-3-galactosyltransferase)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102900 Abo-001 ENSMUSG00000015787 10090 - 2:26842503-26864979 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonLungOvaryPlacentaTestisENSMUST00000102900
Transcript ID Bladder Brain Colon Lung Ovary Placenta Testis
ENSMUST00000102900 0.009±0.00 0.016±0.00 3.150±1.23 0.420±0.28 0.113±0.04 0.163±0.17 0.972±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006IU CIL_0006IU_0002 CGP 2:26667674-26864979
CIL_0006IX CIL_0006IX_0002 CGP 2:26842503-26902879

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004380 IDA glycoprotein-fucosylgalactoside alpha-N-acetylgalactosaminyltransferase activity
GO:0004381 IDA fucosylgalactoside 3-alpha-galactosyltransferase activity
GO:0005576 IEA extracellular region
GO:0005794 IEA Golgi apparatus
GO:0006486 IEA protein glycosylation
GO:0016021 IEA integral component of membrane
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000453660 ABO-001 processed_transcript Homo_sapiens 0 529
ENST00000538324 ABO-201 protein_coding Homo_sapiens 0 527
ENST00000611156 ABO-202 protein_coding Homo_sapiens 0 527

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