C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6298
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122262 Gm6298-001 ENSMUSG00000081761 10090 - X:140084480-140085460 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverOvaryPlacentaTestisENSMUST00000122262
Transcript ID Brain Liver Ovary Placenta Testis
ENSMUST00000122262 0.028±0.00 0.020±0.02 0.084±0.03 0.013±0.00 0.027±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JD CIL_0006JD_0002 CGP X:140006805-140106797
CIL_0006JC CIL_0006JC_0002 CGP X:140062879-140394540

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 248
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 928
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 699
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 926
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 928
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 928
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 737
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 636
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 691
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 246
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 451
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 697
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 640
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 817
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 704
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 512
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 627
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 481
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 512
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 444
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 211
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 558
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 857
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 241
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 699
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 699
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 651
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 671
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 712
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 551
ENST00000511530 GAPDHP71-001 processed_pseudogene Homo_sapiens 0 704
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 374
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 621
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 697
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 732
ENST00000515281 GAPDHP70-001 processed_pseudogene Homo_sapiens 0 604
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 662
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 405
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 822

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