C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006NC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100804-ENSG00000222028 CGP 9606 14:23016543-23044276
GeneTranscriptPositionBiotype
ENSG00000100804 (PSMB5)
proteasome (prosome, macropain) subunit, beta type, 5 		ENST00000334454 (PSMB5-006) 23026297-23034885 nonsense_mediated_decay
ENST00000361611 (PSMB5-002) 23025851-23035145 protein_coding
ENST00000425762 (PSMB5-005) 23025902-23035230 protein_coding
ENST00000460922 (PSMB5-001) 23025858-23034894 protein_coding
ENST00000493471 (PSMB5-004) 23025858-23034890 protein_coding
ENST00000555895 (PSMB5-007) 23016543-23034727 protein_coding
ENSG00000222028 (PSMB11)
proteasome (prosome, macropain) subunit, beta type, 11 		ENST00000408907 (PSMB11-001) 23042167-23044276 protein_coding
ENSG00000279656 (RP11-298I3.6)
 ENST00000624870 (RP11-298I3.6-001) 23023083-23024217 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_0006NC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022193-ENSMUSG00000072423 CGP 10090 14:54614120-54629556
GeneTranscriptPositionBiotype
ENSMUSG00000022193 (Psmb5)
proteasome (prosome, macropain) subunit, beta type 5 		ENSMUST00000022803 (Psmb5-201) 54614120-54617995 protein_coding
ENSMUSG00000072423 (Psmb11)
proteasome (prosome, macropain) subunit, beta type, 11 		ENSMUST00000097177 (Psmb11-201) 54625310-54629556 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006NC_0001ENSG00000100804ENST00000334454ENST00000361611ENST00000425762ENST00000460922ENST00000493471ENST00000555895ENSG00000222028ENST00000408907ENSG00000279656ENST00000624870CIL_0006NC_0002ENSMUSG00000022193ENSMUST00000022803ENSMUSG00000072423ENSMUST00000097177
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006NC_0001ENSG00000100804ENST00000334454ENST00000361611ENST00000425762ENST00000460922ENST00000493471ENSG00000222028ENST00000408907ENSG00000279656ENST00000624870CIL_0006NC_0002ENSMUSG00000022193ENSMUST00000022803ENSMUSG00000072423ENSMUST00000097177
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100804 ENST00000334454 21.112±0.00 16.400±0.00 N/A 33.799±0.00 28.655±0.00 18.948±0.00 21.852±0.00 26.260±0.00 14.276±0.00 22.463±0.00 22.363±0.00 35.626±0.00 41.071±0.00 37.217±7.01
ENST00000361611 N/A N/A 4.889±0.00 28.405±0.00 9.020±0.00 8.135±0.00 8.234±0.00 10.858±0.00 10.409±0.00 7.097±0.00 28.275±0.00 33.626±21.01 50.394±14.60 N/A
ENST00000425762 N/A 9.270±0.00 2.534±0.00 17.563±0.00 4.889±0.00 7.453±2.03 3.978±0.00 5.520±0.00 14.844±0.00 1.738±0.00 25.036±5.19 20.309±8.60 34.580±7.89 19.060±0.00
ENST00000460922 24.472±0.00 28.851±0.00 N/A 47.495±0.00 37.986±0.00 32.385±0.00 27.268±0.00 44.165±0.00 18.192±0.00 29.190±0.00 29.179±0.00 18.566±0.00 15.426±0.00 50.351±0.00
ENST00000493471 12.355±0.00 16.810±0.00 N/A 19.382±0.00 20.118±0.00 15.762±0.00 20.134±0.00 16.153±12.37 29.443±0.00 13.294±0.00 30.558±0.00 2.266±0.00 18.100±1.64 N/A
ENST00000555895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000222028 ENST00000408907 0.030±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.156±0.00 N/A 0.012±0.00 N/A N/A
ENSG00000279656 ENST00000624870 0.203±0.00 1.019±0.00 0.159±0.00 1.098±0.80 0.593±0.20 0.392±0.00 0.182±0.13 1.091±0.00 0.338±0.07 0.371±0.10 0.163±0.00 0.240±0.21 0.183±0.08 0.556±0.11
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022193 ENSMUST00000022803 111.352±2.54 188.005±27.41 82.011±19.31 97.285±35.44 95.754±26.52 99.438±9.07 89.854±6.23 134.896±5.79 109.899±15.58 76.853±5.16 110.927±3.91 133.240±41.39 105.383±34.88 48.176±11.86
ENSMUSG00000072423 ENSMUST00000097177 0.057±0.03 0.052±0.01 0.018±0.01 0.058±0.03 0.050±0.02 0.047±0.01 0.022±0.01 0.030±0.02 0.033±0.03 0.062±0.01 0.011±0.00 0.101±0.03 0.195±0.06 0.062±0.03

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