C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) subunit, beta type 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022803 Psmb5-201 ENSMUSG00000022193 10090 - 14:54614120-54617995 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022803
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022803 111.352±2.54 188.005±27.41 82.011±19.31 97.285±35.44 95.754±26.52 99.438±9.07 89.854±6.23 134.896±5.79 109.899±15.58 76.853±5.16 110.927±3.91 133.240±41.39 105.383±34.88 48.176±11.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ND CIL_0006ND_0002 CGP 14:54583663-54617995
CIL_0006NC CIL_0006NC_0002 CGP 14:54614120-54629556

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000502 IEA proteasome complex
GO:0004298 IEA threonine-type endopeptidase activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005829 TAS cytosol
GO:0005839 IDA proteasome core complex
GO:0006979 IDA response to oxidative stress
GO:0008233 IDA peptidase activity
GO:0043161 IDA proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000113111 psmb5-001 protein_coding Danio_rerio 0 311
ENST00000334454 PSMB5-006 nonsense_mediated_decay Homo_sapiens 0 499
ENST00000361611 PSMB5-002 protein_coding Homo_sapiens 0 957
ENST00000425762 PSMB5-005 protein_coding Homo_sapiens 0 769
ENST00000460922 PSMB5-001 protein_coding Homo_sapiens 0 344
ENST00000493471 PSMB5-004 protein_coding Homo_sapiens 0 616
ENST00000555895 PSMB5-007 protein_coding Homo_sapiens 0 490
ENST00000562293 RP11-329J18.4-001 processed_pseudogene Homo_sapiens 0 538

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