C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006OD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198796-ENSG00000172175 CGP 9606 18:58481247-58750139
GeneTranscriptPositionBiotype
ENSG00000172175 (MALT1)
mucosa associated lymphoid tissue lymphoma translocation gene 1 		ENST00000345724 (MALT1-002) 58671532-58748154 protein_coding
ENST00000348428 (MALT1-001) 58671386-58750139 protein_coding
ENST00000587438 (MALT1-005) 58741431-58745792 retained_intron
ENST00000589873 (MALT1-003) 58733510-58748031 retained_intron
ENST00000591792 (MALT1-004) 58672207-58700586 protein_coding
ENSG00000198796 (ALPK2)
alpha-kinase 2 		ENST00000361673 (ALPK2-001) 58481247-58628957 protein_coding
ENST00000587399 (ALPK2-006) 58544228-58579212 processed_transcript
ENST00000587842 (ALPK2-005) 58538140-58579024 processed_transcript
ENST00000589204 (ALPK2-003) 58528752-58537119 retained_intron
ENST00000590642 (ALPK2-004) 58580260-58580973 processed_transcript
ENST00000590662 (ALPK2-002) 58577944-58580169 retained_intron
ENSG00000239659 (RPL9P31)
ribosomal protein L9 pseudogene 31 		ENST00000495117 (RPL9P31-001) 58631259-58632120 processed_pseudogene
ENSG00000266946 (MRPL37P1)
mitochondrial ribosomal protein L37 pseudogene 1 		ENST00000592451 (MRPL37P1-001) 58690356-58692153 processed_pseudogene
ENSG00000267257 (RP11-1151B14.4)
 ENST00000591360 (RP11-1151B14.4-001) 58535415-58538552 antisense
ENSG00000267476 (RP11-126O1.4)
 ENST00000587080 (RP11-126O1.4-002) 58672738-58677614 antisense
ENST00000588835 (RP11-126O1.4-001) 58672613-58752730 antisense
ENSG00000267579 (RP11-126O1.2)
 ENST00000589794 (RP11-126O1.2-001) 58557070-58566677 antisense
ENSG00000274354 (RP11-1151B14.5)
 ENST00000610389 (RP11-1151B14.5-001) 58511598-58512310 sense_intronic
ENSG00000275418 (RP11-126O1.6)
 ENST00000622763 (RP11-126O1.6-001) 58659858-58660524 lincRNA
CIL_0006OD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032845-ENSMUSG00000032688 CGP 10090 18:65265529-65478823
GeneTranscriptPositionBiotype
ENSMUSG00000032688 (Malt1)
mucosa associated lymphoid tissue lymphoma translocation gene 1 		ENSMUST00000049248 (Malt1-001) 65430963-65478823 protein_coding
ENSMUSG00000032845 (Alpk2)
alpha-kinase 2 		ENSMUST00000035548 (Alpk2-002) 65265529-65393887 protein_coding
ENSMUST00000141250 (Alpk2-001) 65274743-65349534 protein_coding
ENSMUST00000182629 (Alpk2-003) 65363049-65393888 processed_transcript
ENSMUSG00000093283 (Gm22567)
predicted gene, 22567 		ENSMUST00000175542 (Gm22567-201) 65427469-65427810 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006OD_0001ENSG00000172175ENST00000345724ENST00000348428ENST00000587438ENST00000589873ENST00000591792ENSG00000198796ENST00000361673ENST00000587399ENST00000587842ENST00000589204ENST00000590642ENST00000590662ENSG00000239659ENST00000495117ENSG00000266946ENST00000592451ENSG00000267257ENST00000591360ENSG00000267476ENST00000587080ENST00000588835ENSG00000267579ENST00000589794ENSG00000274354ENST00000610389ENSG00000275418ENST00000622763CIL_0006OD_0002ENSMUSG00000032688ENSMUST00000049248ENSMUSG00000032845ENSMUST00000035548ENSMUST00000141250ENSMUST00000182629ENSMUSG00000093283ENSMUST00000175542
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006OD_0001ENSG00000172175ENST00000345724ENST00000348428ENSG00000198796ENST00000361673ENST00000587399ENST00000589204ENST00000590662ENSG00000239659ENST00000495117ENSG00000266946ENST00000592451ENSG00000267257ENST00000591360ENSG00000267476ENST00000587080ENSG00000267579ENST00000589794ENSG00000274354ENST00000610389ENSG00000275418ENST00000622763CIL_0006OD_0002ENSMUSG00000032688ENSMUST00000049248ENSMUSG00000032845ENSMUST00000035548ENSMUST00000141250ENSMUST00000182629ENSMUSG00000093283ENSMUST00000175542
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000172175 ENST00000345724 1.206±0.00 N/A 0.683±0.00 0.458±0.04 1.857±1.09 0.736±0.00 0.518±0.00 1.074±0.00 4.217±0.00 2.315±0.86 0.845±0.00 3.421±1.28 1.043±0.60 9.998±5.80
ENST00000348428 1.343±0.00 2.811±0.00 N/A 0.914±0.00 1.039±0.08 1.561±0.16 1.625±0.63 2.060±0.00 0.694±0.00 N/A 0.597±0.00 1.639±0.81 1.203±0.34 5.351±2.22
ENST00000587438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198796 ENST00000361673 N/A 0.316±0.00 0.330±0.00 0.010±0.00 0.354±0.00 0.049±0.04 8.732±5.09 0.266±0.00 N/A 0.112±0.08 6.264±4.37 0.053±0.03 0.258±0.00 0.220±0.05
ENST00000587399 N/A N/A N/A N/A N/A 0.484±0.00 N/A N/A 0.278±0.00 N/A N/A 0.761±0.00 N/A N/A
ENST00000587842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589204 0.100±0.00 N/A 0.927±0.00 0.031±0.03 N/A N/A N/A 0.677±0.00 0.004±0.00 N/A N/A 0.084±0.00 0.185±0.02 N/A
ENST00000590642 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590662 N/A N/A 1.081±0.00 N/A N/A 0.041±0.00 N/A 0.784±0.00 N/A N/A N/A 0.121±0.00 N/A N/A
ENSG00000239659 ENST00000495117 0.021±0.00 N/A N/A N/A 0.105±0.00 0.019±0.00 N/A 0.021±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000266946 ENST00000592451 N/A 0.337±0.00 N/A 0.095±0.00 0.087±0.00 N/A 0.051±0.03 0.163±0.07 0.037±0.00 0.317±0.00 0.431±0.00 0.114±0.09 0.036±0.00 0.392±0.00
ENSG00000267257 ENST00000591360 0.132±0.00 0.249±0.00 4.875±0.00 N/A 0.513±0.27 0.074±0.06 13.771±2.57 1.254±0.12 0.268±0.00 0.253±0.18 9.450±0.43 0.162±0.10 0.337±0.26 0.913±0.35
ENSG00000267476 ENST00000587080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.609±0.00 N/A
ENST00000588835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267579 ENST00000589794 N/A N/A N/A N/A N/A N/A 0.052±0.00 N/A N/A N/A N/A N/A N/A 15.311±8.37
ENSG00000274354 ENST00000610389 N/A 0.062±0.00 N/A N/A N/A N/A 0.093±0.07 0.020±0.00 N/A N/A N/A 0.043±0.02 N/A 0.128±0.00
ENSG00000275418 ENST00000622763 N/A 0.664±0.00 N/A N/A N/A N/A 0.114±0.00 N/A N/A 0.061±0.00 N/A N/A 0.197±0.05 0.454±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032688 ENSMUST00000049248 4.257±2.24 7.280±1.34 3.488±1.34 0.993±0.40 9.793±3.52 5.342±0.38 1.489±0.58 2.610±0.99 1.949±1.03 4.698±1.78 0.396±0.28 5.167±1.57 1.906±0.52 1.853±0.80
ENSMUSG00000032845 ENSMUST00000035548 0.090±0.07 0.065±0.03 0.039±0.00 0.022±0.02 0.535±0.44 0.032±0.01 11.247±0.72 0.105±0.01 0.012±0.00 0.190±0.08 6.249±0.86 0.075±0.02 0.019±0.00 0.125±0.07
ENSMUST00000141250 0.015±0.00 N/A 0.021±0.00 0.076±0.00 0.233±0.17 0.032±0.01 N/A N/A 0.014±0.01 N/A 1.606±0.16 0.062±0.04 0.046±0.02 0.041±0.01
ENSMUST00000182629 0.054±0.00 0.294±0.09 0.831±0.21 0.857±0.56 0.452±0.00 0.238±0.02 N/A 0.246±0.12 0.763±0.81 0.276±0.00 N/A 1.742±2.39 2.197±1.54 0.489±0.33
ENSMUSG00000093283 ENSMUST00000175542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.715±0.00

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