C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006QC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000034988-ENSDARG00000054848 CGP 7955 19:42130622-42174178
GeneTranscriptPositionBiotype
ENSDARG00000034988 (asb4)
ankyrin repeat and SOCS box-containing 4 		ENSDART00000048438 (asb4-001) 42130622-42142877 protein_coding
ENSDART00000142773 (asb4-002) 42134012-42138861 protein_coding
ENSDARG00000054848 (pdk4)
pyruvate dehydrogenase kinase, isozyme 4 		ENSDART00000077121 (pdk4-201) 42152058-42174178 protein_coding
ENSDART00000145135 (pdk4-001) 42150884-42160570 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0006QC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000005981-ENSG00000004799 CGP 9606 7:95478444-95596491
GeneTranscriptPositionBiotype
ENSG00000004799 (PDK4)
pyruvate dehydrogenase kinase, isozyme 4 		ENST00000005178 (PDK4-001) 95583499-95596491 protein_coding
ENST00000468445 (PDK4-005) 95586680-95587545 retained_intron
ENST00000473301 (PDK4-003) 95594771-95596460 retained_intron
ENST00000473796 (PDK4-002) 95584375-95592760 retained_intron
ENST00000498190 (PDK4-004) 95587484-95589717 retained_intron
ENSG00000005981 (ASB4)
ankyrin repeat and SOCS box containing 4 		ENST00000257621 (ASB4-002) 95478444-95496182 processed_transcript
ENST00000325885 (ASB4-001) 95485901-95540232 protein_coding
ENST00000428113 (ASB4-003) 95485901-95528801 protein_coding
ENSG00000279525 (GS1-306C12.1)
 ENST00000624998 (GS1-306C12.1-001) 95542145-95544542 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_0006QC_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042607-ENSMUSG00000019577 CGP 10090 6:5383386-5496309
GeneTranscriptPositionBiotype
ENSMUSG00000019577 (Pdk4)
pyruvate dehydrogenase kinase, isoenzyme 4 		ENSMUST00000019721 (Pdk4-001) 5483351-5496309 protein_coding
ENSMUST00000134068 (Pdk4-002) 5494863-5496275 retained_intron
ENSMUSG00000042607 (Asb4)
ankyrin repeat and SOCS box-containing 4 		ENSMUST00000043294 (Asb4-001) 5383386-5433022 protein_coding
ENSMUST00000183358 (Asb4-002) 5390427-5402249 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006QC_0001ENSDARG00000034988ENSDART00000048438ENSDART00000142773ENSDARG00000054848ENSDART00000077121ENSDART00000145135CIL_0006QC_0002ENSG00000004799ENST00000005178ENST00000468445ENST00000473301ENST00000473796ENST00000498190ENSG00000005981ENST00000257621ENST00000325885ENST00000428113ENSG00000279525ENST00000624998CIL_0006QC_0003ENSMUSG00000019577ENSMUST00000019721ENSMUST00000134068ENSMUSG00000042607ENSMUST00000043294ENSMUST00000183358
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006QC_0001ENSDARG00000034988ENSDART00000048438ENSDART00000142773ENSDARG00000054848ENSDART00000077121ENSDART00000145135CIL_0006QC_0002ENSG00000004799ENST00000005178ENST00000473796ENSG00000005981ENST00000257621ENST00000325885ENST00000428113ENSG00000279525ENST00000624998CIL_0006QC_0003ENSMUSG00000019577ENSMUST00000019721ENSMUST00000134068ENSMUSG00000042607ENSMUST00000043294ENSMUST00000183358
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000034988 ENSDART00000048438 N/A N/A N/A 0.227±0.16 N/A N/A 2.196±1.50 N/A N/A N/A 2.525±0.00 N/A N/A N/A
ENSDART00000142773 N/A N/A N/A 0.284±0.10 N/A N/A N/A N/A 0.047±0.00 N/A N/A N/A N/A N/A
ENSDARG00000054848 ENSDART00000077121 N/A N/A N/A N/A N/A N/A N/A 7.186±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000145135 N/A N/A N/A 5.305±2.53 N/A N/A 86.899±57.46 18.897±2.99 N/A N/A 15.604±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000004799 ENST00000005178 463.153±0.00 33.174±0.00 6.978±0.00 10.885±5.42 47.127±20.76 124.324±116.22 290.842±277.06 75.467±35.06 19.484±1.47 21.167±4.86 624.585±436.87 12.754±11.18 23.913±12.09 15.416±13.49
ENST00000468445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473301 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473796 N/A N/A 2.373±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000005981 ENST00000257621 0.103±0.00 N/A N/A N/A N/A N/A N/A N/A 0.319±0.00 N/A N/A 0.109±0.04 N/A N/A
ENST00000325885 N/A N/A 0.013±0.00 N/A 0.331±0.31 0.089±0.00 0.773±0.54 N/A 0.036±0.00 0.079±0.04 2.681±0.22 0.034±0.02 0.615±0.35 0.135±0.00
ENST00000428113 N/A N/A N/A N/A N/A 0.276±0.00 N/A 0.230±0.00 N/A 0.087±0.00 N/A N/A 0.336±0.00 N/A
ENSG00000279525 ENST00000624998 0.036±0.00 0.119±0.00 N/A 0.036±0.00 0.079±0.00 0.008±0.00 0.025±0.00 0.038±0.00 N/A 0.050±0.00 0.028±0.02 0.040±0.02 0.027±0.01 0.051±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000019577 ENSMUST00000019721 21.095±13.97 39.933±18.79 17.335±2.09 0.379±0.13 18.391±6.95 2.655±1.16 57.951±3.11 7.866±2.54 3.708±4.87 5.826±0.94 90.580±34.30 4.811±1.93 3.009±2.47 0.304±0.15
ENSMUST00000134068 27.843±19.69 41.407±14.20 N/A N/A 40.711±26.66 4.546±0.97 N/A 5.622±0.14 1.837±0.00 7.481±2.46 N/A 4.924±1.69 N/A 0.502±0.12
ENSMUSG00000042607 ENSMUST00000043294 2.146±1.81 1.305±0.54 0.502±0.11 6.294±1.48 0.587±0.21 0.175±0.03 1.766±0.13 0.267±0.11 1.229±1.22 0.347±0.13 3.450±0.91 6.745±3.10 4.799±3.36 13.035±6.26
ENSMUST00000183358 N/A N/A N/A N/A N/A 0.088±0.01 N/A N/A 0.049±0.00 0.243±0.00 N/A N/A N/A N/A

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