C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006S1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000187969-ENSG00000147100 CGP 9606 X:74304190-74533917
GeneTranscriptPositionBiotype
ENSG00000147100 (SLC16A2)
solute carrier family 16, member 2 (thyroid hormone transporter) 		ENST00000587091 (SLC16A2-001) 74421461-74533917 protein_coding
ENST00000590447 (SLC16A2-002) 74521120-74532608 protein_coding
ENSG00000187969 (ZCCHC13)
zinc finger, CCHC domain containing 13 		ENST00000339534 (ZCCHC13-001) 74304190-74305031 protein_coding
ENSG00000213269 (AC004386.4)
 ENST00000393214 (AC004386.4-001) 74376125-74376885 processed_pseudogene
ENSG00000213695 (RPS7P14)
ribosomal protein S7 pseudogene 14 		ENST00000426405 (RPS7P14-001) 74409518-74410100 processed_pseudogene
ENSG00000230665 (PRKRIRP1)
protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) pseudogene 1 		ENST00000398672 (PRKRIRP1-001) 74396871-74399550 processed_pseudogene
ENSG00000231206 (HNRNPA1P25)
heterogeneous nuclear ribonucleoprotein A1 pseudogene 25 		ENST00000422644 (HNRNPA1P25-001) 74473017-74473953 processed_pseudogene
ENSG00000239745 (RN7SL790P)
RNA, 7SL, cytoplasmic 790, pseudogene 		ENST00000474043 (RN7SL790P-201) 74390692-74390989 misc_RNA
CIL_0006S1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031330-ENSMUSG00000033965 CGP 10090 X:103630586-103821965
GeneTranscriptPositionBiotype
ENSMUSG00000031330 (Zcchc13)
zinc finger, CCHC domain containing 13 		ENSMUST00000033692 (Zcchc13-001) 103630586-103631670 protein_coding
ENSMUSG00000033965 (Slc16a2)
solute carrier family 16 (monocarboxylic acid transporters), member 2 		ENSMUST00000042664 (Slc16a2-001) 103697414-103821965 protein_coding
ENSMUST00000148684 (Slc16a2-002) 103706384-103734188 protein_coding
ENSMUST00000171837 (Slc16a2-003) 103699851-103706454 retained_intron
ENSMUSG00000081414 (Gm3943)
predicted gene 3943 		ENSMUST00000118606 (Gm3943-001) 103684615-103685332 processed_pseudogene
ENSMUSG00000083019 (Gm6222)
predicted pseudogene 6222 		ENSMUST00000120787 (Gm6222-001) 103763021-103763416 transcribed_processed_pseudogene
ENSMUST00000182143 (Gm6222-002) 103762917-103763545 processed_transcript
ENSMUSG00000083213 (Gm14875)
predicted gene 14875 		ENSMUST00000120881 (Gm14875-001) 103680577-103680895 processed_pseudogene
ENSMUSG00000083263 (Gm14874)
predicted gene 14874 		ENSMUST00000118995 (Gm14874-001) 103643555-103644727 processed_pseudogene
ENSMUSG00000083605 (Gm14893)
predicted gene 14893 		ENSMUST00000117904 (Gm14893-001) 103778693-103779000 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006S1_0001ENSG00000147100ENST00000587091ENST00000590447ENSG00000187969ENST00000339534ENSG00000213269ENST00000393214ENSG00000213695ENST00000426405ENSG00000230665ENST00000398672ENSG00000231206ENST00000422644ENSG00000239745ENST00000474043CIL_0006S1_0002ENSMUSG00000031330ENSMUST00000033692ENSMUSG00000033965ENSMUST00000042664ENSMUST00000148684ENSMUST00000171837ENSMUSG00000081414ENSMUST00000118606ENSMUSG00000083019ENSMUST00000120787ENSMUST00000182143ENSMUSG00000083213ENSMUST00000120881ENSMUSG00000083263ENSMUST00000118995ENSMUSG00000083605ENSMUST00000117904
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006S1_0001ENSG00000147100ENST00000587091ENST00000590447ENSG00000187969ENST00000339534ENSG00000213269ENST00000393214ENSG00000213695ENST00000426405ENSG00000230665ENST00000398672ENSG00000231206ENST00000422644ENSG00000239745ENST00000474043CIL_0006S1_0002ENSMUSG00000031330ENSMUST00000033692ENSMUSG00000033965ENSMUST00000042664ENSMUST00000148684ENSMUST00000171837ENSMUSG00000081414ENSMUST00000118606ENSMUSG00000083019ENSMUST00000120787ENSMUST00000182143ENSMUSG00000083213ENSMUST00000120881ENSMUSG00000083263ENSMUST00000118995ENSMUSG00000083605ENSMUST00000117904
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000147100 ENST00000587091 4.198±0.00 3.323±0.00 N/A 2.958±2.61 13.460±0.00 2.807±2.14 2.967±0.00 10.568±3.24 6.373±4.78 3.713±3.20 0.500±0.47 6.931±7.10 7.226±2.10 3.079±1.98
ENST00000590447 N/A N/A 0.867±0.00 1.544±0.00 0.645±0.00 0.667±0.00 0.112±0.00 N/A N/A 0.459±0.00 0.422±0.00 0.217±0.00 N/A N/A
ENSG00000187969 ENST00000339534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.066±0.00 14.788±7.09
ENSG00000213269 ENST00000393214 0.032±0.00 0.033±0.00 N/A N/A 0.032±0.00 0.030±0.00 0.030±0.00 0.032±0.00 0.014±0.00 0.045±0.00 0.029±0.00 0.037±0.00 N/A 0.043±0.00
ENSG00000213695 ENST00000426405 0.076±0.00 0.054±0.00 N/A 0.084±0.00 0.057±0.03 0.101±0.00 0.048±0.00 0.082±0.00 0.024±0.00 0.076±0.00 0.093±0.00 0.068±0.00 N/A 0.071±0.02
ENSG00000230665 ENST00000398672 0.019±0.00 N/A N/A 0.073±0.00 0.005±0.00 N/A N/A N/A N/A N/A 0.093±0.00 0.025±0.01 0.019±0.00 N/A
ENSG00000231206 ENST00000422644 0.078±0.00 N/A N/A 0.041±0.00 0.080±0.00 0.012±0.00 N/A N/A 0.040±0.00 N/A 0.024±0.00 0.028±0.00 0.063±0.00 N/A
ENSG00000239745 ENST00000474043 N/A 0.058±0.00 N/A 0.063±0.00 0.121±0.00 0.109±0.00 0.056±0.00 0.060±0.00 N/A N/A N/A N/A N/A 0.053±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031330 ENSMUST00000033692 0.074±0.03 N/A 0.103±0.02 0.067±0.05 N/A N/A N/A 0.090±0.05 0.017±0.01 N/A N/A 0.046±0.02 0.588±0.22 41.137±11.46
ENSMUSG00000033965 ENSMUST00000042664 6.667±4.38 21.204±2.75 4.633±0.08 9.918±0.46 5.041±2.04 1.504±0.55 2.613±0.18 47.150±11.34 31.091±26.37 13.340±0.91 0.366±0.17 27.900±10.43 0.353±0.25 0.728±0.17
ENSMUST00000148684 N/A N/A N/A N/A N/A 2.198±0.00 N/A N/A N/A N/A N/A N/A 1.013±0.00 N/A
ENSMUST00000171837 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.301±0.00 N/A
ENSMUSG00000081414 ENSMUST00000118606 N/A N/A N/A 0.061±0.03 N/A N/A N/A 0.086±0.02 N/A 0.066±0.00 N/A 0.049±0.00 0.069±0.00 N/A
ENSMUSG00000083019 ENSMUST00000120787 N/A 0.097±0.00 N/A N/A 0.131±0.00 0.301±0.00 N/A 0.211±0.00 0.163±0.07 N/A 0.314±0.00 N/A 0.023±0.00 N/A
ENSMUST00000182143 0.227±0.12 0.279±0.00 0.017±0.00 0.127±0.03 0.481±0.25 N/A 0.567±0.26 0.332±0.10 0.114±0.06 0.183±0.03 N/A 0.211±0.07 0.051±0.00 0.158±0.05
ENSMUSG00000083213 ENSMUST00000120881 N/A N/A N/A 0.242±0.18 N/A N/A N/A 0.250±0.00 0.250±0.00 N/A N/A 0.266±0.01 0.034±0.00 N/A
ENSMUSG00000083263 ENSMUST00000118995 N/A N/A N/A 0.217±0.00 N/A 0.673±0.00 N/A 0.178±0.06 0.027±0.00 N/A N/A N/A 0.272±0.00 N/A
ENSMUSG00000083605 ENSMUST00000117904 N/A N/A N/A N/A N/A N/A N/A N/A 0.352±0.00 N/A N/A N/A N/A N/A

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