C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000398672 PRKRIRP1-001 ENSG00000230665 9606 - X:74396871-74399550 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastMuscleOvaryPlacentaENST00000398672
Transcript ID Adipose Brain Breast Muscle Ovary Placenta
ENST00000398672 0.019±0.00 0.073±0.00 0.005±0.00 0.093±0.00 0.025±0.01 0.019±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006S1 CIL_0006S1_0001 CGP X:74304190-74533917

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033009 Prkrir-001 protein_coding Mus_musculus 0 1101
ENSMUST00000153566 Prkrir-004 nonsense_mediated_decay Mus_musculus 0 424
ENSMUST00000126356 Prkrir-002 nonsense_mediated_decay Mus_musculus 0 359
ENSMUST00000146473 Prkrir-003 processed_transcript Mus_musculus 0 300

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