C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006SR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000069433-ENSDARG00000091614 CGP 7955 7:27671370-27703939
GeneTranscriptPositionBiotype
ENSDARG00000069433 (tnk1)
tyrosine kinase, non-receptor, 1
ENSDART00000135313 (tnk1-001) 27671779-27690652 protein_coding
ENSDART00000139678 (tnk1-004) 27683635-27684274 retained_intron
ENSDART00000140528 (tnk1-002) 27671370-27676763 protein_coding
ENSDART00000141353 (tnk1-003) 27675714-27677041 protein_coding
ENSDARG00000091614 (CR848032.2)
Uncharacterized protein
ENSDART00000128801 (CR848032.2-201) 27693854-27703939 protein_coding
CIL_0006SR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000174292-ENSG00000187838 CGP 9606 17:7380534-7394843
GeneTranscriptPositionBiotype
ENSG00000174292 (TNK1)
tyrosine kinase, non-receptor, 1
ENST00000570896 (TNK1-002) 7380534-7389774 protein_coding
ENST00000574794 (TNK1-005) 7381089-7383468 retained_intron
ENST00000575268 (TNK1-003) 7381046-7383728 retained_intron
ENST00000576136 (TNK1-006) 7384266-7386655 retained_intron
ENST00000576207 (TNK1-009) 7381091-7383718 nonsense_mediated_decay
ENST00000576716 (TNK1-007) 7387134-7388699 protein_coding
ENST00000576812 (TNK1-001) 7380837-7389737 protein_coding
ENST00000577009 (TNK1-008) 7384247-7386622 nonsense_mediated_decay
ENSG00000187838 (TMEM256-PLSCR3)
TMEM256-PLSCR3 readthrough (NMD candidate)
ENST00000324822 (TMEM256-PLSCR3-001) 7389727-7394570 protein_coding
ENST00000535512 (TMEM256-PLSCR3-201) 7389730-7394843 protein_coding
ENST00000571078 (TMEM256-PLSCR3-011) 7390448-7394274 protein_coding
ENST00000571541 (TMEM256-PLSCR3-007) 7389730-7394508 retained_intron
ENST00000571802 (TMEM256-PLSCR3-010) 7392846-7394524 protein_coding
ENST00000573070 (TMEM256-PLSCR3-002) 7389727-7394842 nonsense_mediated_decay
ENST00000573213 (TMEM256-PLSCR3-009) 7392884-7394545 protein_coding
ENST00000573774 (TMEM256-PLSCR3-005) 7389730-7394565 retained_intron
ENST00000574401 (TMEM256-PLSCR3-003) 7389733-7394807 protein_coding
ENST00000575434 (TMEM256-PLSCR3-013) 7390050-7393482 protein_coding
ENST00000575543 (TMEM256-PLSCR3-006) 7389735-7394515 retained_intron
ENST00000576201 (TMEM256-PLSCR3-004) 7389733-7394535 protein_coding
ENST00000576362 (TMEM256-PLSCR3-008) 7389754-7394268 protein_coding
ENST00000619711 (TMEM256-PLSCR3-202) 7389730-7394843 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006SR_0001ENSDARG00000069433ENSDART00000135313ENSDART00000139678ENSDART00000140528ENSDART00000141353ENSDARG00000091614ENSDART00000128801CIL_0006SR_0002ENSG00000174292ENST00000570896ENST00000574794ENST00000575268ENST00000576136ENST00000576207ENST00000576716ENST00000576812ENST00000577009ENSG00000187838ENST00000324822ENST00000535512ENST00000571078ENST00000571541ENST00000571802ENST00000573070ENST00000573213ENST00000573774ENST00000574401ENST00000575434ENST00000575543ENST00000576201ENST00000576362ENST00000619711
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006SR_0001ENSDARG00000069433ENSDART00000135313ENSDARG00000091614ENSDART00000128801CIL_0006SR_0002ENSG00000174292ENST00000570896ENST00000576812ENSG00000187838ENST00000324822ENST00000535512ENST00000573213ENST00000574401ENST00000575434ENST00000576362
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000069433 ENSDART00000135313 N/A N/A N/A 0.230±0.09 N/A N/A 1.823±0.64 9.675±7.22 0.120±0.00 N/A 0.256±0.00 N/A N/A N/A
ENSDART00000139678 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000140528 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000091614 ENSDART00000128801 N/A N/A N/A 0.122±0.06 N/A N/A 0.149±0.06 0.144±0.00 N/A N/A 0.049±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000174292 ENST00000570896 N/A N/A N/A 0.916±0.00 N/A 0.780±0.00 N/A N/A 0.383±0.00 0.286±0.00 N/A 2.590±0.00 N/A 2.971±0.00
ENST00000574794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576136 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576812 N/A N/A 0.558±0.00 N/A 0.403±0.00 2.997±0.00 N/A 4.602±0.00 N/A 0.290±0.00 N/A 0.691±0.00 N/A 3.154±0.00
ENST00000577009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000187838 ENST00000324822 11.998±0.00 28.193±0.00 N/A N/A 14.854±0.00 8.666±0.00 N/A N/A N/A N/A N/A 13.878±0.01 12.096±6.36 8.851±0.00
ENST00000535512 6.414±0.00 N/A N/A N/A N/A N/A 4.120±0.00 N/A N/A N/A N/A 10.799±0.00 N/A N/A
ENST00000571078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573213 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.918±0.00 N/A N/A N/A
ENST00000573774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574401 N/A N/A N/A 3.029±0.00 N/A N/A N/A N/A 0.968±0.00 N/A N/A 12.487±0.00 4.824±0.85 N/A
ENST00000575434 16.449±0.00 N/A N/A N/A N/A 11.018±0.00 N/A N/A N/A N/A N/A N/A 9.207±0.00 N/A
ENST00000575543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576362 N/A N/A N/A N/A N/A N/A 4.636±0.00 6.374±5.25 N/A 10.296±9.81 8.488±0.00 14.319±3.98 13.236±4.06 N/A
ENST00000619711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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