C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glyceraldehyde-3-phosphate dehydrogenase, spermatogenic
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182634 Gapdhs-001 ENSMUSG00000061099 10090 - 7:30729780-30743681 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000182634
Transcript ID Testis
ENSMUST00000182634 148.758±14.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006UZ CIL_0006UZ_0002 CGP 7:30727701-30743681

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004365 IDA glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005929 IDA cilium
GO:0006006 IEA glucose metabolic process
GO:0006096 IEA glycolytic process
GO:0030317 IMP sperm motility
GO:0031514 IDA motile cilium
GO:0035686 IDA sperm fibrous sheath
GO:0050661 IEA NADP binding
GO:0051287 IEA NAD binding
GO:0055114 IEA oxidation-reduction process
GO:0097228 IDA sperm principal piece

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000063800 gapdh-001 protein_coding Danio_rerio 0 250
ENSDART00000139939 gapdh-004 protein_coding Danio_rerio 0 217
ENSDART00000147739 gapdh-002 protein_coding Danio_rerio 0 195
ENST00000222286 GAPDHS-001 protein_coding Homo_sapiens 0 933
ENST00000434621 GAPDHP68-001 processed_pseudogene Homo_sapiens 0 252

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