C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006VY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000004219-ENSDARG00000077671 CGP 7955 16:383307-416359
GeneTranscriptPositionBiotype
ENSDARG00000004219 (SLC6A3)
solute carrier family 6 (neurotransmitter transporter), member 3 		ENSDART00000027337 (SLC6A3-202) 392443-393643 protein_coding
ENSDART00000129303 (SLC6A3-201) 383307-398690 protein_coding
ENSDARG00000077671 (CABZ01078889.1)
Uncharacterized protein 		ENSDART00000009431 (CABZ01078889.1-201) 408939-416359 protein_coding
CIL_0006VY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000142319-ENSG00000153395 CGP 9606 5:1392790-1523977
GeneTranscriptPositionBiotype
ENSG00000142319 (SLC6A3)
solute carrier family 6 (neurotransmitter transporter), member 3 		ENST00000270349 (SLC6A3-001) 1392790-1445430 protein_coding
ENST00000511750 (SLC6A3-004) 1414741-1416578 retained_intron
ENST00000512002 (SLC6A3-003) 1394029-1401307 protein_coding
ENST00000513308 (SLC6A3-002) 1416028-1442975 protein_coding
ENSG00000153395 (LPCAT1)
lysophosphatidylcholine acyltransferase 1 		ENST00000283415 (LPCAT1-002) 1461423-1523977 protein_coding
ENST00000475622 (LPCAT1-001) 1456480-1523962 nonsense_mediated_decay
ENST00000503252 (LPCAT1-003) 1461429-1467325 processed_transcript
ENST00000507282 (LPCAT1-006) 1488377-1494928 retained_intron
ENST00000513757 (LPCAT1-008) 1479476-1494778 retained_intron
ENST00000514484 (LPCAT1-004) 1483428-1523740 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006VY_0001ENSDARG00000004219ENSDART00000027337ENSDART00000129303ENSDARG00000077671ENSDART00000009431CIL_0006VY_0002ENSG00000142319ENST00000270349ENST00000511750ENST00000512002ENST00000513308ENSG00000153395ENST00000283415ENST00000475622ENST00000503252ENST00000507282ENST00000513757ENST00000514484
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006VY_0001ENSDARG00000004219ENSDART00000027337ENSDART00000129303ENSDARG00000077671ENSDART00000009431CIL_0006VY_0002ENSG00000142319ENST00000270349ENST00000512002ENST00000513308ENSG00000153395ENST00000283415ENST00000503252
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000004219 ENSDART00000027337 N/A N/A N/A N/A N/A N/A N/A N/A 0.045±0.00 N/A N/A N/A N/A N/A
ENSDART00000129303 N/A N/A N/A N/A N/A N/A N/A N/A 0.033±0.00 N/A 0.097±0.00 N/A N/A N/A
ENSDARG00000077671 ENSDART00000009431 N/A N/A N/A 10.087±4.62 N/A N/A 5.610±3.09 3.787±0.28 0.378±0.00 N/A 2.039±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000142319 ENST00000270349 N/A 0.029±0.00 N/A 0.014±0.00 N/A 0.080±0.00 N/A 0.044±0.00 N/A 0.057±0.00 N/A 0.168±0.08 N/A 0.115±0.00
ENST00000511750 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512002 N/A N/A N/A N/A 0.166±0.00 N/A N/A N/A N/A 0.038±0.00 N/A 0.113±0.03 N/A 0.168±0.00
ENST00000513308 N/A 0.031±0.00 N/A N/A N/A N/A 0.054±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000153395 ENST00000283415 2.069±0.00 9.710±0.00 1.158±0.00 5.292±1.98 3.745±3.03 4.991±4.12 1.976±1.64 5.726±5.34 1.990±0.21 17.449±2.98 0.512±0.29 11.930±6.16 19.029±5.14 4.463±3.14
ENST00000475622 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503252 1.598±0.00 8.186±0.00 N/A N/A 1.477±0.00 1.557±0.00 0.181±0.00 1.214±0.46 N/A 13.921±0.00 0.370±0.00 8.767±4.00 3.997±0.21 2.947±1.21
ENST00000507282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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