C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysophosphatidylcholine acyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000475622 LPCAT1-001 ENSG00000153395 9606 - 5:1456480-1523962 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006VY CIL_0006VY_0002 CGP 5:1392790-1523977

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005783 ISS endoplasmic reticulum
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005794 ISS Golgi apparatus
GO:0005811 IDA lipid particle
GO:0006644 TAS phospholipid metabolic process
GO:0006654 TAS phosphatidic acid biosynthetic process
GO:0008152 IEA metabolic process
GO:0008654 ISS phospholipid biosynthetic process
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016746 IEA transferase activity, transferring acyl groups
GO:0019432 TAS triglyceride biosynthetic process
GO:0036148 TAS phosphatidylglycerol acyl-chain remodeling
GO:0036151 IDA phosphatidylcholine acyl-chain remodeling
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0046474 TAS glycerophospholipid biosynthetic process
GO:0047184 ISS 1-acylglycerophosphocholine O-acyltransferase activity
GO:0047192 IEA 1-alkylglycerophosphocholine O-acetyltransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022099 Lpcat1-001 protein_coding Mus_musculus 0 1478
ENSMUST00000123766 Lpcat1-003 nonsense_mediated_decay Mus_musculus 0 1203
ENSMUST00000147566 Lpcat1-002 nonsense_mediated_decay Mus_musculus 0 950
ENSMUST00000133791 Lpcat1-004 retained_intron Mus_musculus 0 785

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