C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: solute carrier family 6 (neurotransmitter transporter), member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000129303 SLC6A3-201 ENSDARG00000004219 7955 - 16:383307-398690 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverMuscleENSDART00000129303
Transcript ID Liver Muscle
ENSDART00000129303 0.033±0.00 0.097±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006VY CIL_0006VY_0001 CGP 16:383307-416359

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005328 IEA neurotransmitter:sodium symporter activity
GO:0006836 IEA neurotransmitter transport
GO:0016021 IEA integral to membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022100 Slc6a3-201 protein_coding Mus_musculus 0 483
ENSMUST00000033752 Slc6a8-001 protein_coding Mus_musculus 0.000000003 69
ENSMUST00000114465 Slc6a8-002 protein_coding Mus_musculus 0.000000002 69
ENSMUST00000114467 Slc6a8-201 protein_coding Mus_musculus 0.000000002 69
ENSMUST00000146796 Slc6a8-011 retained_intron Mus_musculus 0.0000000006 69
ENSMUST00000164449 Slc6a8-006 protein_coding Mus_musculus 0.000000001 69
ENSMUST00000168831 Slc6a8-003 protein_coding Mus_musculus 0.000000001 69
ENST00000253122 SLC6A8-002 protein_coding Homo_sapiens 0.00000000005 75
ENST00000270349 SLC6A3-001 protein_coding Homo_sapiens 0 521
ENST00000476466 SLC6A8-004 processed_transcript Homo_sapiens 0.000000000006 75
ENST00000621716 SLC6A3-201 protein_coding Homo_sapiens 0 521

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