C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006WB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000040635-ENSDARG00000074126 CGP 7955 8:16944122-17034527
GeneTranscriptPositionBiotype
ENSDARG00000040635 (rnf11b)
ring finger protein 11b 		ENSDART00000098691 (rnf11b-001) 16944122-16983853 protein_coding
ENSDARG00000074126 (ttc39a)
tetratricopeptide repeat domain 39A 		ENSDART00000108659 (ttc39a-201) 16990392-17034358 protein_coding
ENSDART00000132681 (ttc39a-002) 17005696-17034527 protein_coding
ENSDART00000146469 (ttc39a-001) 16989758-17034527 protein_coding
CIL_0006WB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000123091-ENSG00000085831 CGP 9606 1:51236271-51345116
GeneTranscriptPositionBiotype
ENSG00000085831 (TTC39A)
tetratricopeptide repeat domain 39A 		ENST00000262675 (TTC39A-017) 51287812-51330173 protein_coding
ENST00000262676 (TTC39A-002) 51297218-51331346 protein_coding
ENST00000371747 (TTC39A-003) 51295538-51330562 protein_coding
ENST00000371750 (TTC39A-005) 51287970-51322258 protein_coding
ENST00000380849 (TTC39A-007) 51306024-51330202 protein_coding
ENST00000401051 (TTC39A-010) 51309392-51345116 protein_coding
ENST00000411642 (TTC39A-012) 51301705-51330947 protein_coding
ENST00000413473 (TTC39A-001) 51287258-51345116 protein_coding
ENST00000422925 (TTC39A-008) 51303084-51325976 protein_coding
ENST00000431927 (TTC39A-009) 51294458-51305593 processed_transcript
ENST00000439482 (TTC39A-006) 51302357-51330564 protein_coding
ENST00000447632 (TTC39A-004) 51287258-51322210 protein_coding
ENST00000524442 (TTC39A-016) 51301393-51303158 processed_transcript
ENST00000525906 (TTC39A-018) 51290092-51296860 protein_coding
ENST00000527205 (TTC39A-011) 51311257-51345116 protein_coding
ENST00000530004 (TTC39A-013) 51287258-51297990 protein_coding
ENST00000532836 (TTC39A-015) 51309399-51325953 protein_coding
ENST00000534098 (TTC39A-014) 51287986-51297960 processed_transcript
ENSG00000123091 (RNF11)
ring finger protein 11 		ENST00000242719 (RNF11-001) 51236271-51273455 protein_coding
ENST00000486691 (RNF11-003) 51269918-51271536 processed_transcript
ENST00000494873 (RNF11-002) 51236339-51271562 processed_transcript
ENSG00000233406 (RP11-296A18.5)
 ENST00000480705 (RP11-296A18.5-001) 51250603-51251472 processed_pseudogene
ENSG00000236434 (RP11-296A18.6)
 ENST00000422306 (RP11-296A18.6-001) 51264916-51266074 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006WB_0001ENSDARG00000040635ENSDART00000098691ENSDARG00000074126ENSDART00000108659ENSDART00000132681ENSDART00000146469CIL_0006WB_0002ENSG00000085831ENST00000262675ENST00000262676ENST00000371747ENST00000371750ENST00000380849ENST00000401051ENST00000411642ENST00000413473ENST00000422925ENST00000431927ENST00000439482ENST00000447632ENST00000524442ENST00000525906ENST00000527205ENST00000530004ENST00000532836ENST00000534098ENSG00000123091ENST00000242719ENST00000486691ENST00000494873ENSG00000233406ENST00000480705ENSG00000236434ENST00000422306
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006WB_0001ENSDARG00000040635ENSDART00000098691ENSDARG00000074126ENSDART00000108659ENSDART00000132681ENSDART00000146469CIL_0006WB_0002ENSG00000085831ENST00000262675ENST00000262676ENST00000371750ENST00000380849ENST00000413473ENST00000422925ENST00000431927ENST00000439482ENST00000524442ENST00000525906ENST00000530004ENST00000534098ENSG00000123091ENST00000242719ENST00000486691ENST00000494873ENSG00000233406ENST00000480705ENSG00000236434ENST00000422306
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000040635 ENSDART00000098691 N/A N/A N/A 13.264±7.69 N/A N/A 3.720±2.84 1.403±0.56 1.911±0.00 N/A 3.961±0.00 N/A N/A N/A
ENSDARG00000074126 ENSDART00000108659 N/A N/A N/A N/A N/A N/A N/A N/A 0.024±0.00 N/A N/A N/A N/A N/A
ENSDART00000132681 N/A N/A N/A N/A N/A N/A 0.055±0.00 N/A 0.045±0.00 N/A N/A N/A N/A N/A
ENSDART00000146469 N/A N/A N/A 0.079±0.02 N/A N/A 0.063±0.00 0.530±0.00 N/A N/A 0.308±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000085831 ENST00000262675 N/A 0.230±0.00 N/A N/A N/A N/A 1.903±0.00 N/A N/A N/A N/A 2.710±0.00 N/A N/A
ENST00000262676 N/A 0.109±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.151±0.00 0.039±0.03 N/A
ENST00000371747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371750 N/A N/A N/A N/A N/A 1.772±0.00 N/A N/A N/A 1.554±0.00 N/A 0.891±0.61 N/A 11.901±0.00
ENST00000380849 N/A N/A N/A N/A N/A N/A N/A 0.177±0.00 N/A N/A N/A N/A N/A N/A
ENST00000401051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000411642 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000413473 N/A N/A N/A 0.601±0.00 N/A 1.024±0.00 2.676±0.00 14.350±0.00 N/A 0.485±0.00 0.517±0.00 N/A 0.095±0.00 N/A
ENST00000422925 N/A N/A N/A N/A N/A N/A N/A N/A 0.211±0.00 N/A N/A N/A 0.242±0.00 N/A
ENST00000431927 N/A N/A N/A N/A 6.625±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439482 N/A N/A N/A 1.222±0.00 N/A N/A N/A N/A N/A N/A N/A 4.721±0.00 N/A 28.142±0.00
ENST00000447632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524442 N/A N/A N/A N/A N/A N/A N/A N/A 1.565±0.00 N/A N/A N/A N/A N/A
ENST00000525906 0.568±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.754±0.00 0.350±0.00 43.155±0.00
ENST00000527205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530004 0.136±0.00 N/A N/A N/A 2.837±0.00 N/A 0.565±0.16 5.659±0.00 N/A N/A N/A 0.426±0.00 0.102±0.07 N/A
ENST00000532836 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534098 0.168±0.00 N/A N/A N/A N/A N/A 0.767±0.00 N/A N/A N/A 0.875±0.00 1.220±0.00 0.190±0.01 11.708±0.00
ENSG00000123091 ENST00000242719 8.840±0.00 4.327±0.00 5.553±0.00 30.739±9.74 10.379±2.06 9.074±4.40 8.386±0.09 6.682±4.09 8.629±5.52 12.139±0.98 3.942±0.23 20.813±10.74 15.116±8.72 8.630±0.00
ENST00000486691 N/A N/A 12.248±0.00 41.763±0.00 N/A 12.222±0.00 10.520±0.00 N/A 23.944±0.00 12.013±0.00 14.470±0.00 N/A N/A 16.970±0.00
ENST00000494873 29.848±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.847±0.00 N/A N/A N/A
ENSG00000233406 ENST00000480705 0.307±0.00 0.388±0.00 1.626±0.00 0.118±0.01 0.380±0.08 0.219±0.07 0.146±0.06 0.191±0.00 0.609±0.50 0.657±0.42 0.337±0.00 0.246±0.09 0.208±0.00 0.534±0.14
ENSG00000236434 ENST00000422306 0.232±0.00 1.024±0.00 N/A 1.136±0.00 0.999±0.00 0.996±0.00 0.074±0.00 0.762±0.00 0.280±0.00 0.324±0.00 0.104±0.00 1.046±0.98 N/A 0.402±0.00

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