C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane 9 superfamily protein member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000217315 TM9SF4-001 ENSG00000101337 9606 + 20:32109736-32167258 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000217315
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000217315 11.655±0.00 8.857±0.00 5.636±4.10 8.919±0.00 1.983±0.00 9.309±0.00 7.742±0.00 12.999±0.00 16.072±0.00 14.935±0.00 14.224±7.05 15.924±1.47 7.856±1.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071A CIL_00071A_0002 CGP 20:32052188-32167258
CIL_00071B CIL_00071B_0002 CGP 20:32109506-32207791

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000089027 Tm9sf4-001 protein_coding Mus_musculus 0 2846
ENSMUST00000137446 Tm9sf4-002 processed_transcript Mus_musculus 0 2414
ENSDART00000006765 tm9sf4-001 protein_coding Danio_rerio 0 1147
ENSMUST00000152807 Tm9sf4-004 retained_intron Mus_musculus 0 1092
ENSMUST00000147978 Tm9sf4-003 retained_intron Mus_musculus 0 1072
ENSMUST00000134922 Tm9sf4-009 processed_transcript Mus_musculus 0 952
ENSMUST00000149390 Tm9sf4-005 retained_intron Mus_musculus 0 833
ENSMUST00000141220 Tm9sf4-006 processed_transcript Mus_musculus 0 806
ENSDART00000011554 tm9sf4-201 protein_coding Danio_rerio 0 710
ENSMUST00000145010 Tm9sf4-008 processed_transcript Mus_musculus 0 520
ENSMUST00000140988 Tm9sf4-007 retained_intron Mus_musculus 0 407

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