C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane 9 superfamily protein member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000398022 TM9SF4-002 ENSG00000101337 9606 + 20:32109506-32167258 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000398022
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000398022 7.072±0.00 8.218±0.00 2.090±0.00 5.914±0.74 7.050±0.62 7.171±1.93 1.766±0.00 7.438±1.54 4.343±0.00 2.664±0.00 12.430±8.33 12.347±2.65 6.472±4.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071A CIL_00071A_0002 CGP 20:32052188-32167258
CIL_00071B CIL_00071B_0002 CGP 20:32109506-32207791

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000089027 Tm9sf4-001 protein_coding Mus_musculus 0 3003
ENSMUST00000137446 Tm9sf4-002 processed_transcript Mus_musculus 0 2573
ENSDART00000006765 tm9sf4-001 protein_coding Danio_rerio 0 1147
ENSMUST00000147978 Tm9sf4-003 retained_intron Mus_musculus 0 1098
ENSMUST00000152807 Tm9sf4-004 retained_intron Mus_musculus 0 1092
ENSMUST00000134922 Tm9sf4-009 processed_transcript Mus_musculus 0 952
ENSMUST00000141220 Tm9sf4-006 processed_transcript Mus_musculus 0 843
ENSMUST00000149390 Tm9sf4-005 retained_intron Mus_musculus 0 833
ENSDART00000011554 tm9sf4-201 protein_coding Danio_rerio 0 710
ENSMUST00000145010 Tm9sf4-008 processed_transcript Mus_musculus 0 520
ENSMUST00000140988 Tm9sf4-007 retained_intron Mus_musculus 0 407

Loading