C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GTPase activating protein (SH3 domain) binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000169094 G3bp2-204 ENSMUSG00000029405 10090 - 5:92052146-92083557 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000169094
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000169094 3.530±1.31 3.342±0.57 6.957±0.00 11.270±2.99 3.194±1.32 1.655±0.44 2.344±0.21 2.002±0.62 2.645±0.53 2.126±0.36 3.416±0.96 2.806±0.41 3.424±1.49 2.934±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071L CIL_00071L_0002 CGP 5:92006074-92083735
CIL_00051O CIL_00051O_0004 CGP 5:92052146-92202794

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005737 IEA cytoplasm
GO:0007264 ISO small GTPase mediated signal transduction
GO:0044822 IEA poly(A) RNA binding
GO:0051028 IEA mRNA transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357854 G3BP2-003 protein_coding Homo_sapiens 0 2012
ENST00000359707 G3BP2-001 protein_coding Homo_sapiens 0 3910
ENST00000395719 G3BP2-002 protein_coding Homo_sapiens 0 3938
ENST00000499709 G3BP2-015 protein_coding Homo_sapiens 0 309
ENST00000502654 G3BP2-006 processed_transcript Homo_sapiens 0 580
ENST00000503660 G3BP2-008 protein_coding Homo_sapiens 0 942
ENST00000507133 G3BP2-020 retained_intron Homo_sapiens 0 292
ENST00000507252 G3BP2-011 protein_coding Homo_sapiens 0 532
ENST00000507701 G3BP2-007 retained_intron Homo_sapiens 0 206
ENST00000507745 G3BP2-012 protein_coding Homo_sapiens 0 725
ENST00000507947 G3BP2-019 retained_intron Homo_sapiens 0 712
ENST00000508510 G3BP2-013 protein_coding Homo_sapiens 0 324
ENST00000509100 G3BP2-009 protein_coding Homo_sapiens 0 628
ENST00000509561 G3BP2-014 protein_coding Homo_sapiens 0 416
ENST00000510902 G3BP2-018 nonsense_mediated_decay Homo_sapiens 0 355
ENST00000511146 G3BP2-010 protein_coding Homo_sapiens 0 580
ENST00000511868 G3BP2-016 protein_coding Homo_sapiens 0 518
ENST00000513927 G3BP2-017 processed_transcript Homo_sapiens 0 466
ENST00000515457 G3BP2-005 protein_coding Homo_sapiens 0 556

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