C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sterol carrier protein 2, pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000072166 Scp2-ps2-201 ENSMUSG00000058492 10090 - 9:123307508-123307939 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000072166
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000072166 5.928±3.17 5.868±1.34 0.774±0.35 0.289±0.12 1.093±0.43 1.406±0.66 2.129±0.85 6.331±2.45 24.607±24.20 0.545±0.22 0.195±0.09 1.792±1.19 0.277±0.08 0.185±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00073N CIL_00073N_0002 CGP 9:123259058-123462664

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000013079 scp2a-001 protein_coding Danio_rerio 9.94922e-44 180
ENST00000371509 SCP2-007 protein_coding Homo_sapiens 0 505
ENST00000371514 SCP2-001 protein_coding Homo_sapiens 0 505
ENST00000407246 SCP2-011 protein_coding Homo_sapiens 0 505
ENST00000430330 SCP2-008 protein_coding Homo_sapiens 0 484
ENST00000435345 SCP2-015 protein_coding Homo_sapiens 0 505
ENST00000478274 SCP2-006 protein_coding Homo_sapiens 0 418
ENST00000478631 SCP2-009 nonsense_mediated_decay Homo_sapiens 0 505
ENST00000528311 SCP2-010 protein_coding Homo_sapiens 0 505
ENST00000533119 SCP2-014 nonsense_mediated_decay Homo_sapiens 0 392

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