C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00074F_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000147883-ENSG00000176399 CGP 9606 9:22002903-22455740
GeneTranscriptPositionBiotype
ENSG00000147883 (CDKN2B)
cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4) 		ENST00000276925 (CDKN2B-001) 22002903-22009363 protein_coding
ENST00000380142 (CDKN2B-002) 22005987-22009272 protein_coding
ENST00000579591 (CDKN2B-003) 22005203-22006271 retained_intron
ENSG00000176399 (DMRTA1)
DMRT-like family A1 		ENST00000325870 (DMRTA1-001) 22446841-22455740 protein_coding
ENSG00000215221 (UBA52P6)
ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 6 		ENST00000399822 (UBA52P6-001) 22012155-22012536 processed_pseudogene
ENSG00000277653 (CDKN2B-AS)
CDKN2B antisense RNA 1 intronic convserved region 		ENST00000617921 (CDKN2B-AS.1-201) 22117665-22117814 misc_RNA
CIL_00074F_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000073802-ENSMUSG00000043753 CGP 10090 4:89306289-89694772
GeneTranscriptPositionBiotype
ENSMUSG00000043753 (Dmrta1)
doublesex and mab-3 related transcription factor like family A1 		ENSMUST00000052478 (Dmrta1-001) 89688198-89694772 protein_coding
ENSMUST00000131576 (Dmrta1-002) 89679436-89691919 processed_transcript
ENSMUSG00000073802 (Cdkn2b)
cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4) 		ENSMUST00000097981 (Cdkn2b-201) 89306289-89311032 protein_coding
ENSMUSG00000080808 (Gm12608)
predicted gene 12608 		ENSMUST00000122013 (Gm12608-001) 89442217-89444644 processed_pseudogene
ENSMUSG00000085147 (Gm12609)
predicted gene 12609 		ENSMUST00000129908 (Gm12609-001) 89381957-89399880 processed_transcript
ENSMUSG00000086035 (Gm12610)
predicted gene 12610 		ENSMUST00000139272 (Gm12610-001) 89421848-89463487 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00074F_0001ENSG00000147883ENST00000276925ENST00000380142ENST00000579591ENSG00000176399ENST00000325870ENSG00000215221ENST00000399822ENSG00000277653ENST00000617921CIL_00074F_0002ENSMUSG00000043753ENSMUST00000052478ENSMUST00000131576ENSMUSG00000073802ENSMUST00000097981ENSMUSG00000080808ENSMUST00000122013ENSMUSG00000085147ENSMUST00000129908ENSMUSG00000086035ENSMUST00000139272
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00074F_0001ENSG00000147883ENST00000276925ENST00000380142ENST00000579591ENSG00000176399ENST00000325870ENSG00000215221ENST00000399822ENSG00000277653ENST00000617921CIL_00074F_0002ENSMUSG00000043753ENSMUST00000052478ENSMUST00000131576ENSMUSG00000073802ENSMUST00000097981ENSMUSG00000080808ENSMUST00000122013ENSMUSG00000085147ENSMUST00000129908ENSMUSG00000086035ENSMUST00000139272
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000147883 ENST00000276925 4.790±0.00 0.433±0.00 0.054±0.00 0.337±0.06 14.075±9.23 2.249±1.07 0.287±0.11 0.355±0.00 0.763±0.59 2.682±0.71 1.220±0.96 1.124±0.89 0.804±0.39 1.112±0.65
ENST00000380142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.252±0.00 N/A
ENST00000579591 5.945±0.00 0.776±0.00 N/A 0.909±0.00 43.133±0.00 2.971±1.12 0.488±0.00 N/A 1.659±1.49 10.181±0.00 3.738±0.00 5.661±5.36 1.216±0.70 10.047±0.00
ENSG00000176399 ENST00000325870 0.185±0.00 0.124±0.00 1.040±0.00 0.056±0.01 0.278±0.13 0.263±0.12 0.124±0.02 1.710±0.62 1.263±1.03 0.473±0.20 0.092±0.04 0.079±0.04 0.016±0.01 0.096±0.00
ENSG00000215221 ENST00000399822 0.362±0.00 0.386±0.00 N/A 0.062±0.00 0.059±0.00 0.485±0.00 0.151±0.00 N/A 0.098±0.00 N/A 0.189±0.00 0.244±0.14 0.188±0.00 0.201±0.00
ENSG00000277653 ENST00000617921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.269±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000043753 ENSMUST00000052478 0.297±0.23 0.197±0.12 0.021±0.01 0.256±0.19 0.082±0.04 0.110±0.08 0.011±0.00 0.025±0.02 0.033±0.03 N/A 0.006±0.00 1.746±0.83 0.005±0.00 2.763±1.35
ENSMUST00000131576 N/A N/A 0.102±0.00 N/A 0.320±0.00 N/A 0.048±0.00 N/A N/A 0.089±0.00 N/A N/A 0.075±0.00 N/A
ENSMUSG00000073802 ENSMUST00000097981 8.787±4.62 9.189±2.96 5.872±1.57 0.381±0.23 8.753±4.62 80.067±5.35 0.370±0.15 3.078±0.64 0.076±0.03 34.219±2.90 0.784±0.14 20.537±7.23 1.646±0.62 3.881±0.53
ENSMUSG00000080808 ENSMUST00000122013 N/A N/A N/A 0.004±0.00 N/A N/A N/A N/A 0.007±0.00 0.065±0.00 N/A 0.083±0.02 0.014±0.00 N/A
ENSMUSG00000085147 ENSMUST00000129908 0.090±0.00 N/A 0.096±0.00 0.053±0.00 N/A 0.178±0.00 N/A N/A 0.015±0.00 N/A N/A 0.070±0.00 0.164±0.13 0.169±0.07
ENSMUSG00000086035 ENSMUST00000139272 0.164±0.05 N/A 0.016±0.00 0.034±0.00 0.087±0.00 N/A N/A N/A N/A 0.129±0.00 N/A 0.156±0.07 0.095±0.03 0.254±0.11

Loading