C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00074F_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000147883-ENSG00000176399 CGP 9606 9:22002903-22455740
GeneTranscriptPositionBiotype
ENSG00000147883 (CDKN2B)
cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4) 		ENST00000276925 (CDKN2B-001) 22002903-22009363 protein_coding
ENST00000380142 (CDKN2B-002) 22005987-22009272 protein_coding
ENST00000579591 (CDKN2B-003) 22005203-22006271 retained_intron
ENSG00000176399 (DMRTA1)
DMRT-like family A1 		ENST00000325870 (DMRTA1-001) 22446841-22455740 protein_coding
ENSG00000215221 (UBA52P6)
ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 6 		ENST00000399822 (UBA52P6-001) 22012155-22012536 processed_pseudogene
ENSG00000277653 (CDKN2B-AS)
CDKN2B antisense RNA 1 intronic convserved region 		ENST00000617921 (CDKN2B-AS.1-201) 22117665-22117814 misc_RNA

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_00074F_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000073802-ENSMUSG00000043753 CGP 10090 4:89306289-89694772
GeneTranscriptPositionBiotype
ENSMUSG00000043753 (Dmrta1)
doublesex and mab-3 related transcription factor like family A1 		ENSMUST00000052478 (Dmrta1-001) 89688198-89694772 protein_coding
ENSMUST00000131576 (Dmrta1-002) 89679436-89691919 processed_transcript
ENSMUSG00000073802 (Cdkn2b)
cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4) 		ENSMUST00000097981 (Cdkn2b-201) 89306289-89311032 protein_coding
ENSMUSG00000080808 (Gm12608)
predicted gene 12608 		ENSMUST00000122013 (Gm12608-001) 89442217-89444644 processed_pseudogene
ENSMUSG00000085147 (Gm12609)
predicted gene 12609 		ENSMUST00000129908 (Gm12609-001) 89381957-89399880 processed_transcript
ENSMUSG00000086035 (Gm12610)
predicted gene 12610 		ENSMUST00000139272 (Gm12610-001) 89421848-89463487 processed_transcript

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00074F_0001ENSG00000147883ENST00000276925ENST00000380142ENST00000579591ENSG00000176399ENST00000325870ENSG00000215221ENST00000399822ENSG00000277653ENST00000617921CIL_00074F_0002ENSMUSG00000043753ENSMUST00000052478ENSMUST00000131576ENSMUSG00000073802ENSMUST00000097981ENSMUSG00000080808ENSMUST00000122013ENSMUSG00000085147ENSMUST00000129908ENSMUSG00000086035ENSMUST00000139272
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00074F_0001ENSG00000147883ENST00000276925ENST00000380142ENST00000579591ENSG00000176399ENST00000325870ENSG00000215221ENST00000399822ENSG00000277653ENST00000617921CIL_00074F_0002ENSMUSG00000043753ENSMUST00000052478ENSMUST00000131576ENSMUSG00000073802ENSMUST00000097981ENSMUSG00000080808ENSMUST00000122013ENSMUSG00000085147ENSMUST00000129908ENSMUSG00000086035ENSMUST00000139272
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000147883 ENST00000276925 4.790±0.00 0.433±0.00 0.054±0.00 0.337±0.06 14.075±9.23 2.249±1.07 0.287±0.11 0.355±0.00 0.763±0.59 2.682±0.71 1.220±0.96 1.124±0.89 0.804±0.39 1.112±0.65
ENST00000380142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.252±0.00 N/A
ENST00000579591 5.945±0.00 0.776±0.00 N/A 0.909±0.00 43.133±0.00 2.971±1.12 0.488±0.00 N/A 1.659±1.49 10.181±0.00 3.738±0.00 5.661±5.36 1.216±0.70 10.047±0.00
ENSG00000176399 ENST00000325870 0.185±0.00 0.124±0.00 1.040±0.00 0.056±0.01 0.278±0.13 0.263±0.12 0.124±0.02 1.710±0.62 1.263±1.03 0.473±0.20 0.092±0.04 0.079±0.04 0.016±0.01 0.096±0.00
ENSG00000215221 ENST00000399822 0.362±0.00 0.386±0.00 N/A 0.062±0.00 0.059±0.00 0.485±0.00 0.151±0.00 N/A 0.098±0.00 N/A 0.189±0.00 0.244±0.14 0.188±0.00 0.201±0.00
ENSG00000277653 ENST00000617921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.269±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000043753 ENSMUST00000052478 0.297±0.23 0.197±0.12 0.021±0.01 0.256±0.19 0.082±0.04 0.110±0.08 0.011±0.00 0.025±0.02 0.033±0.03 N/A 0.006±0.00 1.746±0.83 0.005±0.00 2.763±1.35
ENSMUST00000131576 N/A N/A 0.102±0.00 N/A 0.320±0.00 N/A 0.048±0.00 N/A N/A 0.089±0.00 N/A N/A 0.075±0.00 N/A
ENSMUSG00000073802 ENSMUST00000097981 8.787±4.62 9.189±2.96 5.872±1.57 0.381±0.23 8.753±4.62 80.067±5.35 0.370±0.15 3.078±0.64 0.076±0.03 34.219±2.90 0.784±0.14 20.537±7.23 1.646±0.62 3.881±0.53
ENSMUSG00000080808 ENSMUST00000122013 N/A N/A N/A 0.004±0.00 N/A N/A N/A N/A 0.007±0.00 0.065±0.00 N/A 0.083±0.02 0.014±0.00 N/A
ENSMUSG00000085147 ENSMUST00000129908 0.090±0.00 N/A 0.096±0.00 0.053±0.00 N/A 0.178±0.00 N/A N/A 0.015±0.00 N/A N/A 0.070±0.00 0.164±0.13 0.169±0.07
ENSMUSG00000086035 ENSMUST00000139272 0.164±0.05 N/A 0.016±0.00 0.034±0.00 0.087±0.00 N/A N/A N/A N/A 0.129±0.00 N/A 0.156±0.07 0.095±0.03 0.254±0.11

Loading