C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007C4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000215183-ENSG00000159899 CGP 9606 9:35752990-35809732
GeneTranscriptPositionBiotype
ENSG00000107185 (RGP1)
RGP1 retrograde golgi transport homolog (S. cerevisiae) 		ENST00000378078 (RGP1-001) 35749287-35758575 protein_coding
ENST00000496906 (RGP1-002) 35749291-35754142 retained_intron
ENSG00000137098 (SPAG8)
sperm associated antigen 8 		ENST00000340291 (SPAG8-001) 35808045-35812272 protein_coding
ENST00000396638 (SPAG8-010) 35809819-35812170 protein_coding
ENST00000460836 (SPAG8-012) 35808045-35811074 retained_intron
ENST00000463889 (SPAG8-005) 35808045-35812155 processed_transcript
ENST00000471631 (SPAG8-004) 35810256-35812175 nonsense_mediated_decay
ENST00000472605 (SPAG8-003) 35810208-35812149 nonsense_mediated_decay
ENST00000475644 (SPAG8-002) 35808047-35812262 nonsense_mediated_decay
ENST00000479751 (SPAG8-008) 35809867-35811416 processed_transcript
ENST00000484764 (SPAG8-009) 35809795-35812188 protein_coding
ENST00000489063 (SPAG8-006) 35808131-35809877 processed_transcript
ENST00000495667 (SPAG8-007) 35810004-35812173 nonsense_mediated_decay
ENST00000497810 (SPAG8-011) 35809836-35812146 protein_coding
ENST00000620013 (SPAG8-201) 35808047-35812262 protein_coding
ENSG00000159899 (NPR2)
natriuretic peptide receptor 2 		ENST00000342694 (NPR2-001) 35792154-35809732 protein_coding
ENST00000421267 (NPR2-003) 35805530-35808580 protein_coding
ENST00000447210 (NPR2-005) 35806085-35809712 protein_coding
ENST00000448821 (NPR2-006) 35806533-35809719 nonsense_mediated_decay
ENST00000464810 (NPR2-002) 35792409-35809732 retained_intron
ENST00000469249 (NPR2-004) 35808401-35809435 retained_intron
ENSG00000227388 (RP11-112J3.16)
 ENST00000431981 (RP11-112J3.16-001) 35772311-35790432 lincRNA
ENST00000574939 (RP11-112J3.16-002) 35772163-35780598 lincRNA
ENSG00000228843 (RP11-112J3.15)
 ENST00000425499 (RP11-112J3.15-001) 35756712-35757940 antisense
CIL_0007C4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000078719-ENSMUSG00000028469 CGP 10090 4:43583216-43651244
GeneTranscriptPositionBiotype
ENSMUSG00000028469 (Npr2)
natriuretic peptide receptor 2 		ENSMUST00000030191 (Npr2-001) 43631935-43651244 protein_coding
ENSMUST00000107874 (Npr2-002) 43632185-43651244 protein_coding
ENSMUST00000123351 (Npr2-008) 43641262-43644379 protein_coding
ENSMUST00000123883 (Npr2-003) 43641116-43651244 processed_transcript
ENSMUST00000128549 (Npr2-004) 43641284-43651244 protein_coding
ENSMUST00000130093 (Npr2-010) 43646560-43650309 processed_transcript
ENSMUST00000143160 (Npr2-007) 43647197-43648400 processed_transcript
ENSMUST00000144418 (Npr2-005) 43641255-43643098 processed_transcript
ENSMUST00000145817 (Npr2-006) 43644136-43648178 processed_transcript
ENSMUST00000151603 (Npr2-009) 43648005-43650230 processed_transcript
ENSMUSG00000085351 (Gm12472)
predicted gene 12472 		ENSMUST00000153232 (Gm12472-001) 43588072-43608755 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007C4_0001ENSG00000107185ENST00000378078ENST00000496906ENSG00000137098ENST00000340291ENST00000396638ENST00000460836ENST00000463889ENST00000471631ENST00000472605ENST00000475644ENST00000479751ENST00000484764ENST00000489063ENST00000495667ENST00000497810ENST00000620013ENSG00000159899ENST00000342694ENST00000421267ENST00000447210ENST00000448821ENST00000464810ENST00000469249ENSG00000227388ENST00000431981ENST00000574939ENSG00000228843ENST00000425499CIL_0007C4_0002ENSMUSG00000028469ENSMUST00000030191ENSMUST00000107874ENSMUST00000123351ENSMUST00000123883ENSMUST00000128549ENSMUST00000130093ENSMUST00000143160ENSMUST00000144418ENSMUST00000145817ENSMUST00000151603ENSMUSG00000085351ENSMUST00000153232
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007C4_0001ENSG00000107185ENST00000378078ENST00000496906ENSG00000137098ENST00000340291ENST00000396638ENST00000463889ENST00000472605ENST00000475644ENST00000489063ENST00000495667ENSG00000159899ENST00000342694ENST00000421267ENST00000447210ENST00000464810ENST00000469249ENSG00000227388ENST00000431981ENST00000574939ENSG00000228843ENST00000425499CIL_0007C4_0002ENSMUSG00000028469ENSMUST00000030191ENSMUST00000107874ENSMUST00000123883ENSMUST00000128549ENSMUSG00000085351ENSMUST00000153232
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000107185 ENST00000378078 6.078±0.00 3.855±0.00 1.758±0.00 1.001±0.00 4.116±0.00 1.622±0.88 2.748±1.84 2.268±2.04 2.392±0.09 2.334±0.11 5.653±3.57 4.642±1.90 5.262±0.36 6.152±1.29
ENST00000496906 N/A N/A 1.615±0.00 N/A 1.424±0.00 N/A 0.884±0.00 1.306±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000137098 ENST00000340291 N/A N/A N/A N/A N/A N/A N/A 0.217±0.00 N/A N/A N/A N/A N/A N/A
ENST00000396638 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.882±0.00
ENST00000460836 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.642±0.00
ENST00000471631 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.284±0.00 N/A N/A N/A
ENST00000475644 N/A N/A N/A 1.252±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479751 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484764 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489063 4.893±0.00 3.336±0.00 N/A N/A 5.352±0.00 6.228±0.00 N/A 2.949±0.00 1.750±0.00 N/A N/A 9.082±0.00 3.840±0.25 18.453±0.00
ENST00000495667 N/A N/A N/A N/A N/A N/A N/A 0.531±0.00 N/A N/A N/A N/A N/A N/A
ENST00000497810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620013 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000159899 ENST00000342694 1.847±0.00 1.143±0.00 N/A 1.917±1.10 1.755±1.49 3.041±0.00 2.579±2.15 0.900±0.71 1.919±0.00 2.388±0.00 2.580±1.37 3.290±2.09 3.572±0.40 4.499±0.00
ENST00000421267 N/A 2.827±0.00 N/A N/A 1.065±0.00 N/A 0.836±0.00 N/A 1.605±0.00 N/A 3.961±0.00 N/A N/A N/A
ENST00000447210 N/A N/A N/A 1.642±0.00 N/A N/A N/A N/A N/A N/A 1.555±0.00 N/A N/A N/A
ENST00000448821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464810 N/A 1.316±0.00 N/A N/A 2.346±0.00 0.180±0.00 N/A 0.230±0.00 N/A N/A N/A N/A N/A 4.722±0.00
ENST00000469249 5.626±0.00 4.620±0.00 1.522±0.00 4.757±1.15 3.705±1.62 N/A N/A 4.117±0.00 N/A 9.686±0.00 N/A N/A N/A N/A
ENSG00000227388 ENST00000431981 0.026±0.00 0.126±0.00 N/A 0.963±0.00 0.200±0.00 0.273±0.00 0.025±0.00 0.566±0.00 0.023±0.00 0.600±0.24 N/A 0.674±0.28 0.076±0.00 0.896±0.00
ENST00000574939 N/A 0.298±0.00 0.650±0.00 N/A 0.619±0.50 0.448±0.00 0.365±0.00 0.350±0.00 0.585±0.00 N/A 0.102±0.00 0.523±0.46 0.205±0.00 0.345±0.30
ENSG00000228843 ENST00000425499 15.591±0.00 15.328±0.00 N/A 17.560±0.00 10.964±0.00 8.016±0.00 N/A 15.653±0.00 N/A N/A N/A N/A N/A 12.722±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028469 ENSMUST00000030191 4.463±0.00 5.227±0.63 10.181±3.37 4.265±2.21 4.120±0.90 4.381±2.02 N/A N/A 0.691±0.83 11.557±3.06 8.893±3.26 14.213±4.62 1.475±0.56 0.572±0.17
ENSMUST00000107874 N/A N/A N/A 2.886±0.00 N/A N/A N/A N/A N/A N/A N/A 18.418±0.00 1.549±0.00 0.438±0.21
ENSMUST00000123351 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123883 8.501±1.35 N/A 4.390±0.00 4.531±1.50 N/A N/A 2.411±0.00 N/A 1.002±1.23 N/A N/A 6.819±0.00 0.523±0.10 0.264±0.00
ENSMUST00000128549 10.982±3.41 N/A 11.068±1.80 3.891±0.00 8.611±0.27 N/A 8.929±2.33 9.017±1.73 1.751±2.64 N/A 2.918±0.00 11.200±1.77 1.066±0.22 0.551±0.05
ENSMUST00000130093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143160 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151603 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085351 ENSMUST00000153232 0.039±0.00 N/A N/A N/A 0.083±0.00 N/A 0.031±0.00 N/A 0.027±0.01 N/A N/A N/A 0.016±0.00 0.036±0.01

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