C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007DR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000177917-ENSG00000177519 CGP 9606 2:152717893-153478808
GeneTranscriptPositionBiotype
ENSG00000177519 (RPRM)
reprimo, TP53 dependent G2 arrest mediator candidate 		ENST00000325926 (RPRM-001) 153477338-153478808 protein_coding
ENSG00000177917 (ARL6IP6)
ADP-ribosylation factor-like 6 interacting protein 6 		ENST00000326446 (ARL6IP6-001) 152717914-152761253 protein_coding
ENST00000425034 (ARL6IP6-004) 152718959-152759851 nonsense_mediated_decay
ENST00000455875 (ARL6IP6-003) 152718919-152759882 nonsense_mediated_decay
ENST00000463690 (ARL6IP6-005) 152720167-152760595 processed_transcript
ENST00000495469 (ARL6IP6-002) 152717893-152760764 processed_transcript
ENSG00000214024 (AC012501.1)
 ENST00000397284 (AC012501.1-001) 153370612-153371064 processed_pseudogene
ENSG00000226213 (UBQLN4P2)
ubiquilin 4 pseudogene 2 		ENST00000446233 (UBQLN4P2-001) 152876820-152877767 processed_pseudogene
ENSG00000227400 (AC012501.2)
 ENST00000424322 (AC012501.2-003) 153421807-153593288 sense_overlapping
ENST00000454312 (AC012501.2-001) 153421616-153449820 sense_overlapping
ENST00000454537 (AC012501.2-002) 153421685-153449818 sense_overlapping
ENSG00000234932 (AC009969.1)
 ENST00000438726 (AC009969.1-001) 152850653-152850824 processed_pseudogene
ENSG00000242575 (AC012501.3)
 ENST00000437634 (AC012501.3-001) 153420677-153421957 transcribed_processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0007DR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026960-ENSMUSG00000075334 CGP 10090 2:53191726-54085552
GeneTranscriptPositionBiotype
ENSMUSG00000026960 (Arl6ip6)
ADP-ribosylation factor-like 6 interacting protein 6 		ENSMUST00000028336 (Arl6ip6-001) 53192088-53219220 protein_coding
ENSMUST00000155517 (Arl6ip6-002) 53191726-53217534 processed_transcript
ENSMUSG00000075334 (Rprm)
reprimo, TP53 dependent G2 arrest mediator candidate 		ENSMUST00000100089 (Rprm-001) 54084093-54085552 protein_coding
ENSMUSG00000082472 (Gm13501)
predicted gene 13501 		ENSMUST00000118477 (Gm13501-001) 53397509-53398487 processed_pseudogene
ENSMUSG00000083287 (Gm13502)
predicted gene 13502 		ENSMUST00000121574 (Gm13502-001) 53696121-53696804 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007DR_0001ENSG00000177519ENST00000325926ENSG00000177917ENST00000326446ENST00000425034ENST00000455875ENST00000463690ENST00000495469ENSG00000214024ENST00000397284ENSG00000226213ENST00000446233ENSG00000227400ENST00000424322ENST00000454312ENST00000454537ENSG00000234932ENST00000438726ENSG00000242575ENST00000437634CIL_0007DR_0002ENSMUSG00000026960ENSMUST00000028336ENSMUST00000155517ENSMUSG00000075334ENSMUST00000100089ENSMUSG00000082472ENSMUST00000118477ENSMUSG00000083287ENSMUST00000121574
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007DR_0001ENSG00000177519ENST00000325926ENSG00000177917ENST00000326446ENST00000495469ENSG00000214024ENST00000397284ENSG00000226213ENST00000446233ENSG00000227400ENST00000424322ENST00000454312ENST00000454537ENSG00000234932ENST00000438726ENSG00000242575ENST00000437634CIL_0007DR_0002ENSMUSG00000026960ENSMUST00000028336ENSMUST00000155517ENSMUSG00000075334ENSMUST00000100089ENSMUSG00000082472ENSMUST00000118477ENSMUSG00000083287ENSMUST00000121574
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000177519 ENST00000325926 0.313±0.00 0.246±0.00 0.497±0.00 3.745±1.44 0.214±0.03 3.297±3.20 N/A 1.554±0.00 0.193±0.00 0.605±0.00 N/A 9.231±2.03 0.856±0.44 1.959±1.03
ENSG00000177917 ENST00000326446 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.137±0.47 N/A
ENST00000425034 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455875 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463690 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495469 N/A N/A N/A N/A 5.141±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000214024 ENST00000397284 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.049±0.00 0.049±0.00
ENSG00000226213 ENST00000446233 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.043±0.00
ENSG00000227400 ENST00000424322 N/A N/A N/A 0.082±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454312 N/A 0.029±0.00 0.608±0.00 N/A N/A N/A N/A 0.294±0.00 N/A N/A N/A N/A N/A N/A
ENST00000454537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.072±0.00 N/A N/A
ENSG00000234932 ENST00000438726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.088±0.00
ENSG00000242575 ENST00000437634 N/A N/A 0.240±0.00 0.013±0.00 N/A 0.056±0.00 0.140±0.00 N/A N/A N/A N/A 0.028±0.00 0.075±0.00 0.170±0.05
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026960 ENSMUST00000028336 2.417±0.73 12.496±2.90 3.956±0.26 7.649±5.44 4.718±3.24 6.447±1.60 1.820±0.70 2.048±0.75 9.153±7.83 4.516±1.24 1.363±0.56 9.509±5.04 5.884±3.47 10.871±7.75
ENSMUST00000155517 3.491±0.71 N/A 4.413±0.28 1.166±0.00 3.139±1.18 N/A 3.523±0.62 3.345±0.21 1.865±0.01 4.008±0.00 2.519±0.28 11.579±4.27 7.460±3.26 35.019±14.39
ENSMUSG00000075334 ENSMUST00000100089 9.247±9.20 0.714±0.18 0.737±0.14 48.721±18.39 0.176±0.05 5.230±0.46 0.156±0.05 0.656±0.26 0.114±0.09 7.126±1.00 0.048±0.02 5.915±2.31 0.674±1.09 0.901±0.60
ENSMUSG00000082472 ENSMUST00000118477 N/A N/A N/A N/A 0.035±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000083287 ENSMUST00000121574 0.100±0.02 0.937±0.15 0.193±0.00 1.234±1.02 0.405±0.22 0.722±0.48 0.097±0.03 0.374±0.37 2.976±2.25 0.438±0.32 0.053±0.01 0.820±0.37 0.032±0.02 0.706±0.18

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