C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000437634 AC012501.3-001 ENSG00000242575 9606 - 2:153420677-153421957 transcribed_processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartOvaryPlacentaTestisENST00000437634
Transcript ID Bladder Brain Colon Heart Ovary Placenta Testis
ENST00000437634 0.240±0.00 0.013±0.00 0.056±0.00 0.140±0.00 0.028±0.00 0.075±0.00 0.170±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007DR CIL_0007DR_0001 CGP 2:152717893-153478808

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000077577 Tuba1b-001 protein_coding Mus_musculus 0 957
ENSMUST00000122404 Gm14150-001 processed_pseudogene Mus_musculus 0 933
ENSMUST00000077991 Gm5620-001 processed_pseudogene Mus_musculus 0 909
ENSMUST00000097014 Tuba1a-001 protein_coding Mus_musculus 0 896
ENSMUST00000078739 Gm17383-201 pseudogene Mus_musculus 0 667
ENSMUST00000029297 Slc7a11-001 protein_coding Mus_musculus 0 287
ENSMUST00000169666 Gm6682-201 processed_pseudogene Mus_musculus 0 244
ENSMUST00000169182 Gm3756-201 processed_pseudogene Mus_musculus 0 235
ENSMUST00000117636 Gm14892-001 processed_pseudogene Mus_musculus 4e-23 113

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