C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0007ER_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000057016-ENSDARG00000002215 CGP 7955 22:16406379-16506149
GeneTranscriptPositionBiotype
ENSDARG00000002215 (rtca)
RNA 3'-terminal phosphate cyclase
ENSDART00000021666 (rtca-001) 16497252-16506149 protein_coding
ENSDART00000149071 (rtca-002) 16500254-16501130 processed_transcript
ENSDARG00000057016 (cdc14ab)
CDC14 cell division cycle 14 homolog A, b
ENSDART00000105681 (cdc14ab-001) 16406379-16485570 protein_coding
ENSDART00000149051 (cdc14ab-002) 16447122-16490344 protein_coding
CIL_0007ER_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033502-ENSMUSG00000000339 CGP 10090 3:116272553-116508208
GeneTranscriptPositionBiotype
ENSMUSG00000000339 (Rtca)
RNA 3'-terminal phosphate cyclase
ENSMUST00000000348 (Rtca-001) 116488963-116508208 protein_coding
ENSMUST00000124486 (Rtca-005) 116489240-116495965 retained_intron
ENSMUST00000140677 (Rtca-003) 116494151-116508024 nonsense_mediated_decay
ENSMUST00000143425 (Rtca-004) 116499546-116508133 nonsense_mediated_decay
ENSMUST00000153005 (Rtca-002) 116495691-116508065 protein_coding
ENSMUSG00000033502 (Cdc14a)
CDC14 cell division cycle 14A
ENSMUST00000090464 (Cdc14a-001) 116272553-116424032 protein_coding
ENSMUST00000106491 (Cdc14a-002) 116272553-116423986 protein_coding
ENSMUST00000127704 (Cdc14a-003) 116326039-116424032 retained_intron
ENSMUST00000136994 (Cdc14a-005) 116404108-116423895 processed_transcript
ENSMUST00000148857 (Cdc14a-004) 116400186-116423024 retained_intron
ENSMUSG00000097737 (Gm26530)
predicted gene, 26530
ENSMUST00000180969 (Gm26530-201) 116488966-116493358 lincRNA
ENSMUSG00000101175 (RP23-75J20.1)
predicted gene 29151
ENSMUST00000187854 (RP23-75J20.1-001) 116431094-116431562 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007ER_0001ENSDARG00000002215ENSDART00000021666ENSDART00000149071ENSDARG00000057016ENSDART00000105681ENSDART00000149051CIL_0007ER_0002ENSMUSG00000000339ENSMUST00000000348ENSMUST00000124486ENSMUST00000140677ENSMUST00000143425ENSMUST00000153005ENSMUSG00000033502ENSMUST00000090464ENSMUST00000106491ENSMUST00000127704ENSMUST00000136994ENSMUST00000148857ENSMUSG00000097737ENSMUST00000180969ENSMUSG00000101175ENSMUST00000187854
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007ER_0001ENSDARG00000002215ENSDART00000021666ENSDARG00000057016ENSDART00000105681CIL_0007ER_0002ENSMUSG00000000339ENSMUST00000000348ENSMUST00000124486ENSMUST00000140677ENSMUST00000143425ENSMUSG00000033502ENSMUST00000090464ENSMUST00000106491ENSMUST00000136994ENSMUST00000148857ENSMUSG00000097737ENSMUST00000180969ENSMUSG00000101175ENSMUST00000187854
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000002215 ENSDART00000021666 N/A N/A N/A 7.101±0.66 N/A N/A 21.966±8.83 23.180±4.20 2.166±0.00 N/A 5.908±0.00 N/A N/A N/A
ENSDART00000149071 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000057016 ENSDART00000105681 N/A N/A N/A 2.524±1.26 N/A N/A 5.599±5.16 4.276±0.00 0.437±0.00 N/A 2.740±0.00 N/A N/A N/A
ENSDART00000149051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000339 ENSMUST00000000348 2.765±1.12 3.163±1.46 7.756±1.02 14.997±3.83 3.580±0.82 5.543±1.13 2.631±0.64 3.594±1.94 4.444±2.87 4.410±1.14 6.568±0.72 4.982±1.92 10.079±1.80 17.672±6.98
ENSMUST00000124486 N/A N/A N/A 26.572±0.00 N/A N/A N/A N/A N/A N/A N/A 7.885±0.27 10.737±3.40 25.433±0.00
ENSMUST00000140677 N/A N/A N/A 10.067±0.00 N/A N/A 2.390±0.36 N/A 1.456±0.00 N/A 3.125±0.39 N/A 6.369±0.00 20.947±2.58
ENSMUST00000143425 6.399±1.67 24.391±8.72 N/A N/A 9.942±3.57 18.383±1.99 2.746±0.27 7.439±1.53 3.055±0.42 7.250±1.66 N/A 16.532±3.63 6.537±0.00 22.541±3.18
ENSMUST00000153005 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000033502 ENSMUST00000090464 2.218±1.25 1.531±0.94 1.683±0.43 1.281±0.54 1.651±0.55 3.331±1.18 0.502±0.32 2.419±0.33 0.782±0.46 4.409±0.48 1.823±1.24 5.624±1.78 0.925±0.55 9.849±0.70
ENSMUST00000106491 N/A 2.097±0.40 N/A N/A 2.710±1.80 5.394±1.64 0.121±0.00 1.444±0.13 0.232±0.13 3.153±1.06 N/A 2.523±0.60 0.365±0.00 N/A
ENSMUST00000127704 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136994 N/A 3.198±1.22 N/A N/A N/A 3.349±0.17 N/A N/A N/A N/A N/A 5.709±0.77 N/A N/A
ENSMUST00000148857 N/A N/A N/A N/A N/A N/A N/A N/A 0.062±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000097737 ENSMUST00000180969 2.017±0.40 2.304±0.42 2.022±0.17 3.381±1.84 2.003±0.53 2.408±0.24 1.003±0.09 2.512±0.08 1.137±0.50 1.850±0.31 0.801±0.16 3.020±0.97 1.407±0.83 3.464±3.07
ENSMUSG00000101175 ENSMUST00000187854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.373±0.32

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